Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3020g00050 ATGTTCGAGTCACTAGCTTATTCCCAAAGCTTCAAGGGATATGACCTTACCAAACAAAAGAGTCCTGGTTGTTCTCATGCTGTGTCGCGAATTCATAGAAATTTTATTTGCATGTTTTATTCAGATAAACTATCACATGATTTTAGTCACAGGATAAGTCATAAAAATTGTATATCAGAAGGTTTCTTTGAAAGCAAACCTCTCATTGTTCCATCAATTTCTAGTTGGAAAGGTTTCTATTTCTCTAAGTGTAGGCCATTACATTGGGAACGGATGCAGACAAGTGCAACACATGATGTTGCTGGTGCTGTTGAAGTCATCAATGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTGACTGTCTTAATTGTGCCTACATTCAAGTTAATTAAAGCCAGCCCTATACTTGGTTTCTTCTTTGCTGGGGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTAACGGATGTTAAAGTTTTGTCTGAATGGGGTATCCTTTTCTTGTTGTTTGAGATGGGTTTAGAGCTTTCATTTGCACGTCTGAAAGCTCTTGCGAAGTTTTCCTTTGGGATGGGATTGACTCAGGTTGTATTATCAACTTTAGCATTTACTGCTTTTGAACTTCCACCAAATGGAGCCATTGGAACCAAAATTTTGGAAGTCCTTTTCCACTCAAGGCCTGATCTGGTGAATATTAGAAGCATCGATGAAGCTGTGGTGATTGCTGCTGCTCTCTCTCTGTCATCTTCTGCATTTGTTCTACAGCTTCTTGCAGAAAAAGGTGAGCTTCCTACAAGATTTGGTTCAGCAACTCTGGGAATACTTCTTTTGCAGGACATAGCTGTTGTCCCACTTCTAGTCATTCTTCCAGTACTAGAGAGCCAGAATCTGGCTGAGGGAAGTATTTGGCCTATGCTTGCTCTAGAAAGTCTAAAGGCATTAGGCGGATTGGGTCTGCTTTCTCTTGGGGGAAAGTACATTCTTAGAAGAGTTTTTGAGGTTGTTGCAGATGCAAGGAGCTCAGAGGCTTTTGTTGCACTTTGCTTGCTGACTATTGCTGGGACTTCACTTGTCACACAGAATTTGGGCTTTAGTGATACGCTTGGAGCATTTTTAGCTGGGTCACTTTTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCTGACATAAGGCCGTTTAAAGGCTTGCTTCTTGGGTTATTTTTTCTAACTACGGGGACTTCCATCGACATGCAGCTCCTTTTGCGAGAGTGGCCAAATGTACTTTCACTCTTGGCTGGTTTGATTGCTATCAAGACATTAATCATAACTGCAATTGGTCCTTGTGTTGGGCTTACTTTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGGGAGTTTGGATTTGTAGTTTTCTCCTTAGCAAATAGGCTTGGGGTGCTTCCGCTTGAGCTCAACAAGTTGCTAATAATTGTTGTTGTACTATCAATGGTATTAACCCCATTTCTTAACGAAGCAGGAAGAAGGGCTGCTGGTTTTATTGATGACAAATTTGATGCTGAGATTAAAGCTTCTGATATGGTCAACTTTAGTGCCAGTGAACCTGTTGTTATTATTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTCCTGTCCAACCCATTGGCTTCAGGAGATAGTGATGCAGTAGGATGGCCTTATGTGGCTTTTGATCTTGACCCCACAGTGGTAAAGGCTGCTACAAAAGTTGGCTTTCCAATTCGCTATGGGGATGGATCACGTCCAGCTGTTCTTCAATCTGCTGGTATCTCTTCTCCAAAAGCTATCATGGTTATGTACGCTGGCAAGAAGAAGACAGTTGAAGCTGTTCAGAGGCTACGATTTACTTTCCCTGCAGTCCCAATTTATGCCAGAGCTAAAGATCTCGAGCATCTTTTAGATCTGAAGAAAGCAGGTGCAACAGATGCCATTTTGGAAAATGCAGAGACTAGCTTACTGCTGGGTTCTAAGCTTCTGAAAGGCCTTGGCATGATGTCTGATGATGTGGCATTTTTAAGTCAGCTCATTAGAGATTCCATGGAGCTACAAGCTCAACAAGCAGTCAGCCAGTCCGAATACCATGAATCAGATATGATGAAACCACTGCAGGTGAGGGTTGGTAACTTGACAGAGGCACATGTACCTATGGCAACAACTTCACATGAATCTGAATTATCAGAATCGAACCAGGCAGATCATGCTTCAGTCCCTAGAATTCAGATGGAAGTAGAACAAGATTATGAACTCAATCAAGCCGTGAATTTTGAAGAACATAGCGTTTTATGTAGGAAACAAGGTACTGAAGAAAGCTCATTACTTGGATCTCAAGATGCTCTAGGAGAGAAGAATCTGGTGGATCCAACAATCCCTTGTCGCAATGCCATTGAGGAACCCTGA 2430 0.4181 MFESLAYSQSFKGYDLTKQKSPGCSHAVSRIHRNFICMFYSDKLSHDFSHRISHKNCISEGFFESKPLIVPSISSWKGFYFSKCRPLHWERMQTSATHDVAGAVEVINDLGLDTLTFLAVTVLIVPTFKLIKASPILGFFFAGVVLNQFGLIRNLTDVKVLSEWGILFLLFEMGLELSFARLKALAKFSFGMGLTQVVLSTLAFTAFELPPNGAIGTKILEVLFHSRPDLVNIRSIDEAVVIAAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPVLESQNLAEGSIWPMLALESLKALGGLGLLSLGGKYILRRVFEVVADARSSEAFVALCLLTIAGTSLVTQNLGFSDTLGAFLAGSLLAETNFRTQIEADIRPFKGLLLGLFFLTTGTSIDMQLLLREWPNVLSLLAGLIAIKTLIITAIGPCVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMVLTPFLNEAGRRAAGFIDDKFDAEIKASDMVNFSASEPVVIIGFGQMGQVLANFLSNPLASGDSDAVGWPYVAFDLDPTVVKAATKVGFPIRYGDGSRPAVLQSAGISSPKAIMVMYAGKKKTVEAVQRLRFTFPAVPIYARAKDLEHLLDLKKAGATDAILENAETSLLLGSKLLKGLGMMSDDVAFLSQLIRDSMELQAQQAVSQSEYHESDMMKPLQVRVGNLTEAHVPMATTSHESELSESNQADHASVPRIQMEVEQDYELNQAVNFEEHSVLCRKQGTEESSLLGSQDALGEKNLVDPTIPCRNAIEEP 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3020g00050 809 Gene3D - 532 701 - -
Gabi3020g00050 809 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 94 740 - -
Gabi3020g00050 809 Gene3D - 109 507 IPR038770 -
Gabi3020g00050 809 ProSiteProfiles RCK N-terminal domain profile. 532 663 IPR003148 GO:0006813
Gabi3020g00050 809 FunFam Glutathione-regulated potassium-efflux system protein KefB 530 701 - -
Gabi3020g00050 809 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 532 669 IPR036291 -
Gabi3020g00050 809 Pfam Sodium/hydrogen exchanger family 116 501 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Gabi3020g00050 809 Pfam TrkA-N domain 533 655 IPR003148 GO:0006813
Gabi3020g00050 809 FunFam K(+) efflux antiporter 3, chloroplastic 109 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3020g00050 Gabi-Chr3020 401255 412950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3020g00050 1 768 Inorganic Solute Cotransporters AT4G04850 69.152 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3020g00050 K03455 - gmx:100798214 1157.13