Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3020g00041 ATGTTCCCCGGAGGATTTTTCCGTCATGGGTCGCCAACCATTATTCTCACTGCTCTGTTTTTCCTCTGCCTCATTACTTTCTCTCAGTCAGATGAGCTTCAATCACTCATGAAGTTCAAGTCCTCTATCCAAAGTTCAAATGCAAGTGTTTTCAGCTCTTGGACACATGCAAATTCTCCCTGCAACTTCACAGGGATTTTCTGCAATTCCAACGGTTTTGTTTCAGAAATCAACCTTGCGCAGAAACAACTAGTGGGTACTCTTCCTTTTGACTCAATTTGTGAGCTTCAATCGCTTGAGAAGATCTCTGTGGAGTCCAACTTCTTGAACGGAAGCATCAGTGAGGACTTGAAGAACTGCACCAACTTGCAGTACTTGGATTTGGGTGGGAATTTATTCACTGGGGGAGTGCCTGAATTGTCAACTTTGAACAAGTTGAAGTACTTGAATTTAAATGCAAGTGGAATTTCTGGGGTATTTCCATGGAAATCATTGGAAAATCTAGCAAGTCTCACTTTCTTGAGCCTTGGTGATAACCTATTGGAAAGAGCTTCTTTCCCTTTGGAGGTCTTAAAGCTTGAAAAATTGTATTGGCTTTACCTCACAAATTGCAGCATCACAGGGAATATCCCATTGGGTATTGGAAATCTCACTCAGCTTCAGAATCTTGAGCTTTCTGACAACCAATTGTCTGGTGAGATTCCAGCTGATATTGGAAAGCTTAAGAGTCTCAAACAACTTGAGCTATATGACAACTATTTGAGTGGGAAAATCCCACTTGGATTTGGCAACCTTACAAATCTTGTCAAATTTGATGCATCAAATAATCAGCTTGAAGGTGATCTTTCTGAGCTAAGGTCCTTGGCAAACCTTGCGTCCTTGCAGGTTTTTGAAAACCAATTCTCAGGAGCAATTCCAGAAAAGCTTGGAGATCTAGAAAGCCTTGTAGAACTTTCCCTTTATGATAACAAGCTCACTGGTCCTCTTCCTCAAAAGCTTGGCTCCTGGGTAGGTATGCAATTCATTGATGTTTCAGATAATTCGCTTTCTGGTCCTATACCACCTGACATGTGCATGAACAACCAAATTACCGAACTAGCACTGTTAAATAACAGCTTCAGTGGAAGTATACCAGAAACATATGCAAACTGCACATCTTTGGTTCGTTTCCGCCTAAGTAGGAATTCACTTTCGGGTGTTGTTCCTTCTGGCATATGGGGCTTGCCAAATCTGCAACTAATTGATCTTTCAATGAACCATTTTGAAGGTCCAGTGTCATCTGATATTGCCAAAGCAAAATCTCTTGCGCAACTGTTTTTATCTAACAATCAGTTTTCAGGTGAGTTACCCTTGGAAATCTCTGAAGCTTCTTCTTTGGTATCAATTCAGCTAAGTTCAAATCGAATTTCTGGTCACATCCCAGAAACGATTGGCAACTTGAAGAAACTAACTAGTCTTACTTTGAATAAGAACAACCTTTCTGGTATTATACCATATTCTATTAGTTCTTGTGTTTCTCTTAATGAAATAAACCTTGCTGGTAACTCTCTTTCTGGGGAAATACCACCTAGCATTGGGTCTCTGCCTACCCTCAATTCATTGAACTTGTCCTCAAATAGGCTTTCTGGTAAAATTCCATCAAGTTTATCATCCCAGAGACTTAGCCTCCTTGATTTATCGAACAACCAGTTGTTTGGTTCCATACCTGAATCACTGGCCATTTCAGCCTTCAAAGATGGGTTGATGGGAAATCCTGGCTTGTGCAGCCAGACTTTGAAAAATTTCCAACCATGTTCATTGGAGGAATCCAGCAGCTCCAGGCGACTCAGAAACCTTATATTCTGCTTCATTGCTGTTTCAATGGTTCTGCTTGCTTCATCAGCATATTTCCTCTTCATGAAACTGAAGCAGAACAAGTTTGAGAAGCCACTGAAGACTAACTCTTGGAATTTCAAGCAGTACCACATGATAAACTTGAATGAGAATGAAATTATTAATGGGATCAAGGCCGAGAATTTGATTGGAAAAGGAGGATCTGGGAATGTTTACAAGGTTGTGCTTAAAAGTGGGGAAGAATTTGCTGTGAAACACATATGGACTTCAAATACAAGTGACCGGGGAAGTTGCAGGAGCAGCTCAGCTATGCTAAGAAAAAGTTCCCGGTCACCAGAGTTTGATGCAGAGGTGGCCACTCTGAGCTCTATAAGACATGTGAATGTGGTGAAGCTCTATTGTAGCATCACAAGCGAAGATAGTAGTCTCCTTGTTTATGAGTTCTTACCAAACGGGAGTTTGTGGGACAGGTTGCACATTTGTAAGAAGACTCAGATGGGGTGGGAGGTAAGGTATGACATTGCAATGGGTGCTGCTAGAGGATTGGAGTACCTGCACCATGGGTGTGATAGACCTGTTATACACAGGGATGTCAAATCCAGTAATATATTACTTGATGAGGAATGGAAGCCAAGGATTGCTGATTTTGGGCTTGCTAGGATTGTGCAGGGAGGAGCAGGAAATTGGACCCATGTCATTGCTGGAACACTTGGATACATGCCTCCTGAATATGCCTACACTTGCAAAGTGACAGAGAAGAGCGATGTTTATAGTTTTGGAGTAGTCCTAATGGAGTTGGTAACAGGAAAGAGGCCTATGGAACCAGAGTTTGGAGAGAACGAGGACATTGTCCACTGGGTATGCAGCAATATTAGGAGCAAGGAAAATGCGCTTGAATTGGTGGATTCTACCATTGCAAAGCATTTCAAAGAAGATGCCATGAAGGTGTTGAGAATTGCAACATTATGCACTGCAAAATTTCCATCTTCAAGACCGTCAATGAGAATGTTGGTTCAAATGCTGGAAGAGGCAGATCCTTGTACTCTAACCAAAATAATTGTGACCAGAGATGGTTAA 2910 0.4155 MFPGGFFRHGSPTIILTALFFLCLITFSQSDELQSLMKFKSSIQSSNASVFSSWTHANSPCNFTGIFCNSNGFVSEINLAQKQLVGTLPFDSICELQSLEKISVESNFLNGSISEDLKNCTNLQYLDLGGNLFTGGVPELSTLNKLKYLNLNASGISGVFPWKSLENLASLTFLSLGDNLLERASFPLEVLKLEKLYWLYLTNCSITGNIPLGIGNLTQLQNLELSDNQLSGEIPADIGKLKSLKQLELYDNYLSGKIPLGFGNLTNLVKFDASNNQLEGDLSELRSLANLASLQVFENQFSGAIPEKLGDLESLVELSLYDNKLTGPLPQKLGSWVGMQFIDVSDNSLSGPIPPDMCMNNQITELALLNNSFSGSIPETYANCTSLVRFRLSRNSLSGVVPSGIWGLPNLQLIDLSMNHFEGPVSSDIAKAKSLAQLFLSNNQFSGELPLEISEASSLVSIQLSSNRISGHIPETIGNLKKLTSLTLNKNNLSGIIPYSISSCVSLNEINLAGNSLSGEIPPSIGSLPTLNSLNLSSNRLSGKIPSSLSSQRLSLLDLSNNQLFGSIPESLAISAFKDGLMGNPGLCSQTLKNFQPCSLEESSSSRRLRNLIFCFIAVSMVLLASSAYFLFMKLKQNKFEKPLKTNSWNFKQYHMINLNENEIINGIKAENLIGKGGSGNVYKVVLKSGEEFAVKHIWTSNTSDRGSCRSSSAMLRKSSRSPEFDAEVATLSSIRHVNVVKLYCSITSEDSSLLVYEFLPNGSLWDRLHICKKTQMGWEVRYDIAMGAARGLEYLHHGCDRPVIHRDVKSSNILLDEEWKPRIADFGLARIVQGGAGNWTHVIAGTLGYMPPEYAYTCKVTEKSDVYSFGVVLMELVTGKRPMEPEFGENEDIVHWVCSNIRSKENALELVDSTIAKHFKEDAMKVLRIATLCTAKFPSSRPSMRMLVQMLEEADPCTLTKIIVTRDG 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3020g00041 969 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 20 211 - -
Gabi3020g00041 969 Pfam Protein kinase domain 671 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3020g00041 969 ProSitePatterns Protein kinases ATP-binding region signature. 674 696 IPR017441 GO:0005524
Gabi3020g00041 969 FunFam Leucine-rich repeat receptor-like protein kinase TDR 285 600 - -
Gabi3020g00041 969 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Gabi3020g00041 969 SMART serkin_6 668 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3020g00041 969 SUPERFAMILY L domain-like 359 662 - -
Gabi3020g00041 969 SUPERFAMILY L domain-like 31 235 - -
Gabi3020g00041 969 Gene3D Ribonuclease Inhibitor 340 599 IPR032675 -
Gabi3020g00041 969 SMART LRR_typ_2 217 241 IPR003591 -
Gabi3020g00041 969 SMART LRR_typ_2 480 503 IPR003591 -
Gabi3020g00041 969 SMART LRR_typ_2 528 552 IPR003591 -
Gabi3020g00041 969 SMART LRR_typ_2 168 193 IPR003591 -
Gabi3020g00041 969 SMART LRR_typ_2 312 336 IPR003591 -
Gabi3020g00041 969 SUPERFAMILY Protein kinase-like (PK-like) 652 953 IPR011009 -
Gabi3020g00041 969 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 760 966 - -
Gabi3020g00041 969 CDD STKc_IRAK 674 954 - -
Gabi3020g00041 969 SUPERFAMILY L domain-like 191 425 - -
Gabi3020g00041 969 Gene3D Transferase(Phosphotransferase) domain 1 760 962 - -
Gabi3020g00041 969 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Gabi3020g00041 969 Gene3D Ribonuclease Inhibitor 188 240 IPR032675 -
Gabi3020g00041 969 ProSiteProfiles Protein kinase domain profile. 668 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3020g00041 969 FunFam Probable inactive receptor kinase RLK902 29 187 - -
Gabi3020g00041 969 Gene3D Phosphorylase Kinase; domain 1 650 759 - -
Gabi3020g00041 969 Pfam Leucine rich repeat 363 421 IPR001611 GO:0005515
Gabi3020g00041 969 Pfam Leucine rich repeat 458 517 IPR001611 GO:0005515
Gabi3020g00041 969 Gene3D Ribonuclease Inhibitor 242 339 IPR032675 -
Gabi3020g00041 969 FunFam Leucine-rich receptor-like protein kinase family protein 188 284 - -
Gabi3020g00041 969 FunFam Receptor-like protein kinase HAIKU2 651 759 - -
Gabi3020g00041 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3020g00041 Gabi-Chr3020 327609 331067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3020g00041 7 968 Receptor kinase-like Gene Family AT1G09970 57.541 0.0 1091
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gabi3020g00041 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3020g00041 - - gmx:100811489 1520.75