Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3020g00037 ATGGATAGATATAGAAGTTACAATCTGCTCCCGTTGGCCCTGGGAATTTCTTTACTTCTATTCTATGATTCAACAGTTATTCTTTCAATTTTATTTTTTAACTCTTTACTTTTTCTTTTTCCACAGTATAATGAGATCTTGGGCAAGGGTGCTTTCAAGACTGTTTATAGGGGCTTTGATGAAATTGATGGAATAGAAGTTGCTTGGAACCAAGTCCGGATTGATGAACTCTTGCAGTCGGTAGATGATCTTGCAAAATTGTATTCTGAAGTTCATCTATTGAAGTCTCTGAAACATGAAAATATCATAAAGTTCTTTAATTCCTGGATTGATGATAAGAAGAAAACTGTTAACATTATTACTGAGCTATTCACATCTGGAAATTTAAGGCAATATCGTAAGAAGCATAGATATGTTGACATGAAAGCCATAAAAGGTTGGGCTAGACAAATTCTTCAAGGCTTAGTATATCTTCACAGTCACAAGCCACCTATTATTCACAGAGACTTGAAATGCGACAACATCTTTGTAAATGGAAACCATGGAGAAGTTAAGATAGGAGACCTTGGTTTGGCAATTGTCATGCAGCAACCAACTGCTCGAAGTGTTATTGGAACACCTGAGTTTATGGCTCCAGAACTATATGAAGAGGAATACAACGAACTTGTTGACGTCTATTCTTTTGGGATGTGCATGTTGGAGATGGTTACTTTTGAGTACCCATACAGTGAATGCAAAAATCCAGCCCAAATCTATAAGAAAGTTACCTCTGGCATCGAACCTGCATCCCTTAAGAGGGTGAGTGATCCCCAAATTAAGGAGTTTATCAAGAAATGTCTTGTTCCAGCATCTGAAAGATTGTCTGCAAAGGAGCTTCTTAAAGACCCATTTCTGCAAGTTGAGTGTGCGAAGGATCCAATACTTGATCCCTTACAGTTACCTAGTAAATCTCTAAAAGCTATAAATCCGTCCAAGTCTGGTCATCTATCTATGGACCTAGATGCTGACTACAAACAGATCTCTATGAGTACTTATGCCCAAAGCAGCCAGGGAAGTCCACATTGTCTATCTCTTGAAGTTCAAAGGACGTATAAGAACAATGAGTTTAGGTTGAAAGGCATAAAAAATGATGATAACTCAATACCATTGATCTTGCGTATTGCTGATTTATGTGGTCGTGTAAGGAATATACATTTTCTCTTTTACCTTGAGACGGATACTGCAGTCTCTGTTGCCTCAGAGATGGTTGAAAATTTGGAGCTGGCAGATCATGATGTAGCCTTCATAGCTGAGCTTATTGATTACTTGATAATGAAACTTCTACCTGGGTGGAAGCCATCATCTGATTATGCGTCAAGTGGAGGATTAAGTCCGTGTGGTGGTTCTCCAACACTTGGAGATGGCCAAACCTTAATGCCAAGTCCATGGGGTTCTGTCCTAACTAGTGTTCCCTCTGAATTAGCTTATGATCAAGATAACTTCTCTGCGCTTGATACTACTCAAAGAGAAGGTTTTGCAGGAGCTGAAGTGAGCTGCATGTTTAACATTGCTGATAATGATATTTTTGAGGGTGAGTATAGTTCTTCTCCTAGTTTGTCTAGCTTGGAAGATCAATATTCACAAGCATCTGCAGTTTCTGAGATAGTTGTTGAAGATGCTTGCATGAAAAATGACAACCGCCTTGATTTCGATGTTGATGTGAGCTATAAAGGACTGAGTTGGTCCGCCTCAGAACTGGAGCTTGGGGATGCATATTTTGAAGACTTTAAATTGCGGACTACAGACTGCAGTGCTGGAGAAGGCATTGTGATAAATGAATTCTCAAAGAACTCACATTCTACAGACCGAGACTTTTTTGGAACATCTAACGTTATCAGCTTGACAAGCAGTTGTTCTTCTCTATCATTAGCTGACAAAGATATTGATCTTGAACTTAAGCTTGAACTAGATGCAATTGAGTCACAGTATCGGCAATGGTTTCAAGAACTTTCTAGAATGAAGTTCGAGGCCTTGGAAGCTACCAGAAAGAGATGGACAGCCAAGAAGAAACTTGTTTTTCATTGA 2064 0.39 MDRYRSYNLLPLALGISLLLFYDSTVILSILFFNSLLFLFPQYNEILGKGAFKTVYRGFDEIDGIEVAWNQVRIDELLQSVDDLAKLYSEVHLLKSLKHENIIKFFNSWIDDKKKTVNIITELFTSGNLRQYRKKHRYVDMKAIKGWARQILQGLVYLHSHKPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMVTFEYPYSECKNPAQIYKKVTSGIEPASLKRVSDPQIKEFIKKCLVPASERLSAKELLKDPFLQVECAKDPILDPLQLPSKSLKAINPSKSGHLSMDLDADYKQISMSTYAQSSQGSPHCLSLEVQRTYKNNEFRLKGIKNDDNSIPLILRIADLCGRVRNIHFLFYLETDTAVSVASEMVENLELADHDVAFIAELIDYLIMKLLPGWKPSSDYASSGGLSPCGGSPTLGDGQTLMPSPWGSVLTSVPSELAYDQDNFSALDTTQREGFAGAEVSCMFNIADNDIFEGEYSSSPSLSSLEDQYSQASAVSEIVVEDACMKNDNRLDFDVDVSYKGLSWSASELELGDAYFEDFKLRTTDCSAGEGIVINEFSKNSHSTDRDFFGTSNVISLTSSCSSLSLADKDIDLELKLELDAIESQYRQWFQELSRMKFEALEATRKRWTAKKKLVFH 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3020g00037 687 Gene3D Phosphorylase Kinase; domain 1 38 122 - -
Gabi3020g00037 687 Gene3D Transferase(Phosphotransferase) domain 1 124 304 - -
Gabi3020g00037 687 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 395 437 IPR024678 GO:0004674|GO:0005524
Gabi3020g00037 687 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 42 551 - -
Gabi3020g00037 687 CDD STKc_WNK 43 298 - -
Gabi3020g00037 687 Pfam Protein kinase domain 44 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3020g00037 687 SMART serkin_6 41 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3020g00037 687 Gene3D - 379 446 - -
Gabi3020g00037 687 FunFam Probable serine/threonine-protein kinase WNK1 37 122 - -
Gabi3020g00037 687 FunFam probable serine/threonine-protein kinase WNK9 124 303 - -
Gabi3020g00037 687 ProSiteProfiles Protein kinase domain profile. 41 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3020g00037 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Gabi3020g00037 687 SUPERFAMILY Protein kinase-like (PK-like) 44 350 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3020g00037 Gabi-Chr3020 253425 257496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3020g00037 626 683 MAP Kinase Kinase Kinase AT5G41990 41.379 2.17e-07 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gabi3020g00037 Pkinase 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3020g00037 K08867 - qsa:O6P43_027404 890.952