Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3020g00018 ATGGCTTCCCGAAACCAGAACAGGCCTCCTCGCAGCCCCTCAAATAAAAAGGGAGGTGGTGAAGAAGTTCCCTCAGATAAGCGTCGAAGGATTGGAGCAGAAAAAATGGAGCGACAGGGTCGAGCCAGAGCTCCCTTTGCTACACTCAACAACAAAACAGATGCTAATGATGTTGGAGGTGCAGAAGTCCCCGAATGTGGCACTATTGATTTCACGAAAGAGGAAGTAGAGGCGTTGCTGAATGAGAAGATGAAAAAGGGGAATCCCTTTGATACTAAGAAAAAAATGGAACAGATGACAGTCCTCATTAAGCGGTTTAAGGATTGTGTTCGATCCTTTCAAAGAAAGGAAGAAGGCTATATCCAAGAAAAAGAAAAGCTTCAGACTGACCTAGAATCTGCTGAGAGGATACAAGCTTCTCTTTCAACTGAGCTTGAGAAAGTTCGGATTGAGAAATCAGATGCTGAGCGGAAGGTAATGCTATGTTATGATCTGGATAATTTACACACTTGGTTAAATTTTGAAGTCCATGACCAAGCCATTTCCTCACAAGAGTATATTGAGCGTCTGCTGCAGTACAATGAAAACCTTCGATCAGATCTTAATTCAACTAATGAGGCACGCAAACGACTGGAAACAGAGAAACCAACCATTCTGGAGAACCTTAGCAATGTAAGAGCCCACAATAAGGCATTGCAGGAGAAGTTGGCATCCCTTAAAGCTTCACAGGATGAGGCCATACAGCAGAAAGAAATTTTAGCAAATGACATCAAATGTCTACGGAATGAATTAAAACAAATCAGAGATGATCGTGATTGCCAACTGGGACGAGTACAGGCTTTAACTGCTGAAGTAGCAAGATACGAAGAATATACAGGGGAATCATGTGCTAAATTGGATACCTTGATGATTAAAACAAATGCCCTTGAGGAGACATGTTGTTCTCAAAGGAAGCAATTAAATATGCTTCAGCAGCAGTTGATTGCTGAAAAGGAGAAGTTAAAGGTGGCCGATTTATCTGCTTCAGAGACAAGAACAATGTTTGAAGATCAAAACAGGACTATACATGAACTACAGGAACGACTGGCAGAGAAAGAATTCCAAGTAATTGAAGGAGAAAAGTTAAGGAAAAAATTGCACAACACTATACTGGAACTGAAAGGAAATATTCGTGTGTTCTGCCGTGTCCGACCTTTGCTACCGGATGATGGTCCTGGAGCAGATATGGTTGTTTCTTATCCCACGTCAACAGAAGCTCTTGGCCGGGGCATCGAATTGGCACAGAGCGGTCAGAAGTACCCTTTTACATTTGATAAGGTATTTAATCATGAGGCTTCTCAGCAAGATGTTTTCATAGAGATTTCACAGCTTGTACAAAGTGCGCTTGATGGGTACAAGGTCTGTATTTTTGCTTATGGACAGACTGGTTCAGGCAAAACCTATACAATGATGGGTAGGCCTGATGCCCCAGAGTTAAAGGGGTTGATACCACGATCTCTAGAACTGATATTCCAGATTAGTCAGTCCCTGAAAGATCAGGGTTGGAAGTACAAAATGCAGGCTTCAATACTGGAAATATATAATGAGACAATCAGGGATTTGTTATCATCAAATCGGTCAAGTGGTATTGACCTAACACGAACAGAAAACGGTGTTCCGGGAAAGCAGTACGCCATTAAACATGATGTCAATGGAAACACTTATGTTTCAGACCTCACTATTGTAGATGTATGTAGTGTAAATGAGATTTCCTCCCTTCTGCAACAGGCTGCACAAAGCAGGTCTGTAGGAAAAACACATATGAATGAACAATCATCACGAAGTCACTTTGTCTTTACGTTGCGTATATGCGGGATTAATGAGAACACTGAACAACAAGTGCAAGGTGTGTTAAACCTGATTGATTTGGCTGGAAGTGAAAGACTGTCGAGAAGTGGGGCGACTGGGGACCGGTTAAAGGAAACTCAGGCTATCAACAAAAGTCTCTCGTCATTGAGTGATGTTATATTTGCTTTGGCAAAGAAAGAGGAGCATGTCCCCTTTAGGAATTCAAAACTGACATACCTTCTCCAACCATGTCTTGGAGGGGATTCGAAAACTTTAATGTTTGTGAATATCTCCCCTGATCCAGTATCAACTGGAGAGTCACTTTGCTCCCTTCGTTTTGCCGCCAGAGTCAACGCCTGCGAAATTGGTATTCCGCGGCGTCAGACATCCACACGGTCCTTTGATTCTCGTTTGAGTTGTGGATAA 2253 0.4239 MASRNQNRPPRSPSNKKGGGEEVPSDKRRRIGAEKMERQGRARAPFATLNNKTDANDVGGAEVPECGTIDFTKEEVEALLNEKMKKGNPFDTKKKMEQMTVLIKRFKDCVRSFQRKEEGYIQEKEKLQTDLESAERIQASLSTELEKVRIEKSDAERKVMLCYDLDNLHTWLNFEVHDQAISSQEYIERLLQYNENLRSDLNSTNEARKRLETEKPTILENLSNVRAHNKALQEKLASLKASQDEAIQQKEILANDIKCLRNELKQIRDDRDCQLGRVQALTAEVARYEEYTGESCAKLDTLMIKTNALEETCCSQRKQLNMLQQQLIAEKEKLKVADLSASETRTMFEDQNRTIHELQERLAEKEFQVIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDGPGADMVVSYPTSTEALGRGIELAQSGQKYPFTFDKVFNHEASQQDVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPELKGLIPRSLELIFQISQSLKDQGWKYKMQASILEIYNETIRDLLSSNRSSGIDLTRTENGVPGKQYAIKHDVNGNTYVSDLTIVDVCSVNEISSLLQQAAQSRSVGKTHMNEQSSRSHFVFTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPVSTGESLCSLRFAARVNACEIGIPRRQTSTRSFDSRLSCG 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3020g00018 750 FunFam Kinesin-like protein 335 731 - -
Gabi3020g00018 750 MobiDBLite consensus disorder prediction 1 59 - -
Gabi3020g00018 750 CDD KISc_C_terminal 387 731 - -
Gabi3020g00018 750 PRINTS Kinesin heavy chain signature 679 700 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3020g00018 750 PRINTS Kinesin heavy chain signature 464 485 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3020g00018 750 PRINTS Kinesin heavy chain signature 599 616 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3020g00018 750 PRINTS Kinesin heavy chain signature 630 648 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3020g00018 750 ProSiteProfiles Kinesin motor domain profile. 389 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3020g00018 750 Gene3D Kinesin motor domain 331 731 IPR036961 -
Gabi3020g00018 750 PANTHER KINESIN-LIKE PROTEIN KLP-3 232 738 IPR027640 GO:0003777|GO:0007018
Gabi3020g00018 750 Coils Coil 187 214 - -
Gabi3020g00018 750 Coils Coil 117 158 - -
Gabi3020g00018 750 SMART kinesin_4 387 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3020g00018 750 Coils Coil 222 270 - -
Gabi3020g00018 750 Coils Coil 348 368 - -
Gabi3020g00018 750 MobiDBLite consensus disorder prediction 20 41 - -
Gabi3020g00018 750 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 727 IPR027417 -
Gabi3020g00018 750 ProSitePatterns Kinesin motor domain signature. 629 640 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi3020g00018 750 Pfam Kinesin motor domain 395 727 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3020g00018 Gabi-Chr3020 157316 163566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3020g00018 298 741 Calmodulin-binding Proteins AT5G65930 36.522 6.81e-78 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3020g00018 K10405 - gmx:100808278 1089.72