Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3020g00017 ATGGCACAGAAGAAACAACGCCCTTCTCCTCTCGATGAACCACCCACGGCTTCCTCTTCCGAATCAGAGGAAGAAGACCAACAACCTTCATCTCGACAACACGAAGAAGAAGTAGCAGCTTCATCTGAAGAGGAAGACGGAGAAGCTTCAACTGAAGAGGAGGATGACGATGAAGAAGAAAATCATCAACATCCATCTTTGCAACCCTCTGCTAAAAATCCTCCACCCCCTCCTACAAACTCTCACCCCAAACCTTCATCTTCCGAGTCCGCCACTGAATCCGATTCAGGAACCGAATCTGAACCTGAACCCAACCCATCTGCTCCCGGTGCTGCGAACCCTAAAGTGAAACCACTTGCATCCAAGCCTATGGAGCAAACCCCCAAGGCGAGGTCTCAGCCCTCCGCCCCGCCTGCCAGGTCGGGGTCGAAGCGCCCAGCTGCCGACAACAACATGCATGCAACTGACCCTAAACGGTCCAAGAAGAAGGTAACTGTTTCTGCCCTTGCTGCTGTTCCTTTCGATAAGGAGGTTGAGGAGGATGGGAAAAAATCAGGTGATGACCCGAAGAAGCTGTTTCAGAGGATATGGAGCGAAGAAGATGAGATTGCGATTCTCAAGGGTATGGTTGAGTTCGCTTCCAAGACTGGCATGGACCCGATTAAGCAGGTCAATGACTTTCATGATTTTGTGAAGAAGTCGCTTCATGTGGATGCTTCCGTTAACCAGCTGAAAGAGAAGATTCGAAGGCTGAAGAAGAAATTTGAGACCAATGCAGGAAAGGGGAAGAACGGTGAGGGCCCTAAATTCTCAAAGGCTCACGAACAGAAATCATTTGAATTGTCGAAAAAGGTTTGGGCCAATGGAGATGGAGGGGTAGCCAATGGAGCAATGGAGAAGGCTAAGTCTAATGGGAAAGCTGCAAAGATTCTGAAAGAAGGTACTAGCAGCATTAGGAACGCTGCTTCTCCAAAGAAATCAAAACCTGAAACAAATCCCGAAACCAATCTGCCATCGCTTGATTCGCAGGAATCTGAAAAGATGGACATTGATATAATACCTGATACAAATTTGGCTTTGAGCGAAATGATTCGTTTTGGAAAGAGTGGGAGTCTGTTCGGGCTGAATGAGAATGTGATAAAGGGAGGACTGGAATTAATGGAAGCATCAAAGAGGGAAGAGTTGGAGGTGAGGTGGAATAAATTGCAAGTTGCTGAGTTAGAGTTGTTTGCGAAGCGTACACAACTTATTGGGGATCAAGCTAGGTTGATATTGGAGGCGTACAAGTCATCAAACCATTAG 1302 0.4724 MAQKKQRPSPLDEPPTASSSESEEEDQQPSSRQHEEEVAASSEEEDGEASTEEEDDDEEENHQHPSLQPSAKNPPPPPTNSHPKPSSSESATESDSGTESEPEPNPSAPGAANPKVKPLASKPMEQTPKARSQPSAPPARSGSKRPAADNNMHATDPKRSKKKVTVSALAAVPFDKEVEEDGKKSGDDPKKLFQRIWSEEDEIAILKGMVEFASKTGMDPIKQVNDFHDFVKKSLHVDASVNQLKEKIRRLKKKFETNAGKGKNGEGPKFSKAHEQKSFELSKKVWANGDGGVANGAMEKAKSNGKAAKILKEGTSSIRNAASPKKSKPETNPETNLPSLDSQESEKMDIDIIPDTNLALSEMIRFGKSGSLFGLNENVIKGGLELMEASKREELEVRWNKLQVAELELFAKRTQLIGDQARLILEAYKSSNH 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3020g00017 433 MobiDBLite consensus disorder prediction 316 343 - -
Gabi3020g00017 433 MobiDBLite consensus disorder prediction 312 345 - -
Gabi3020g00017 433 MobiDBLite consensus disorder prediction 174 190 - -
Gabi3020g00017 433 MobiDBLite consensus disorder prediction 25 39 - -
Gabi3020g00017 433 MobiDBLite consensus disorder prediction 69 83 - -
Gabi3020g00017 433 Pfam Protein of unknown function, DUF573 193 286 IPR007592 GO:0006355
Gabi3020g00017 433 PANTHER BNAANNG10740D PROTEIN-RELATED 76 427 IPR007592 GO:0006355
Gabi3020g00017 433 MobiDBLite consensus disorder prediction 1 190 - -
Gabi3020g00017 433 MobiDBLite consensus disorder prediction 84 103 - -
Gabi3020g00017 433 MobiDBLite consensus disorder prediction 255 274 - -
Gabi3020g00017 433 Coils Coil 241 261 - -
Gabi3020g00017 433 MobiDBLite consensus disorder prediction 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3020g00017 Gabi-Chr3020 141223 142778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3020g00017 111 430 GeBP Transcription Factor Family AT4G25210 30.769 1.26e-34 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gabi3020g00017 DUF573 2.8e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3020g00017 - - gmx:100791520 437.573