Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3020g00011 ATGTTCGGGTTTTGGCATTTTCTCAAGAGGACACTTGTGTGCAAATCACACCCAAAACAAGTTGATGATGCAGAGGCAAGTAGGCACCAAAACAGTAATCATAGAACAAAGTCAGATAAGCTTAAGCGTTCAAATATCATAGGTTTCATCAGGGGGAGCAACAGGCACTTAAAAATTGTACCACAATGTTTCACTCCAAAACACGAAGTGGGCATTGACATCAGTGATCCCATAACCCCTGAAATTGTTCATGATAGCCCAAACAGTGACATTAGAGTTCGTCGATGTTTTTCTTGTCATCGAAGGAATAGCGGCAGTGAAGGTTCAGAAGATCCTCATACAAGGCTGATAGTTCAGATGGAATCTGATGGTTCTTCAATATTGATTTGTCATAAATGTGGTGAGAAACTAAAAGAACTTGATGCTGTTGAAGCACACCATATCTCTGAGCATTCAGTCACTGAGATTCAAGAAGATTCTAGGCAGATTATTGAAAAAATATGTGGAATAAGCTCGGTTAATCCTGAAAACATGTTGGGGCAGATTGATTGTATCTTAAAAGTCCAGGGCATGCCAAAAACCCTTGCTTGCTTTGAGGAATATAGAGAAATGGTTAAGATTAAGGCTGACAAGCTACAGAAGAAGCACCCGCGTTGCCTAGCTGATGGAAATGAGCTTTTAAGGTTCCATGGCATAACTGTTGCATGCCCTCTTGGAACAAATAGTTCTTATAGCCTTTGCACTTTAGAATACTGTGGTATATGTCAAATCTTGAGACATGGCTTCTCCACCAACAAGGAATCCCAAGGTGCATTAGGGGTCTACACCACTTCCACATGTGGTAAAGCCTTTGATTCCATTAGGCCATCTGAGGAGAGACCAGTTCCAAGAAAGTCTGTTGTAGTGTGTAGAGCAATAGCTGGGAGAATTTATAGTCCTCTCGAAGAAATTCAAGGAAATGTTGATTCAGGATTTGATTCATTGGCAGAAAAAAAAAGTGGTCATTCAGATGCAGATATTGAGGAACTCTACCTACTAAATCCCAAAGCTCTGCTTCCTTGCTTTGTGGTAATATTCAAATAA 1083 0.4035 MFGFWHFLKRTLVCKSHPKQVDDAEASRHQNSNHRTKSDKLKRSNIIGFIRGSNRHLKIVPQCFTPKHEVGIDISDPITPEIVHDSPNSDIRVRRCFSCHRRNSGSEGSEDPHTRLIVQMESDGSSILICHKCGEKLKELDAVEAHHISEHSVTEIQEDSRQIIEKICGISSVNPENMLGQIDCILKVQGMPKTLACFEEYREMVKIKADKLQKKHPRCLADGNELLRFHGITVACPLGTNSSYSLCTLEYCGICQILRHGFSTNKESQGALGVYTTSTCGKAFDSIRPSEERPVPRKSVVVCRAIAGRIYSPLEEIQGNVDSGFDSLAEKKSGHSDADIEELYLLNPKALLPCFVVIFK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3020g00011 360 SUPERFAMILY ADP-ribosylation 203 360 - -
Gabi3020g00011 360 ProSitePatterns Zinc finger C2H2 type domain signature. 130 151 IPR013087 -
Gabi3020g00011 360 Gene3D - 144 360 - -
Gabi3020g00011 360 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3020g00011 Gabi-Chr3020 119651 121297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3020g00011 125 360 C2H2 Transcription Factor Family AT5G54630 56.680 3.75e-86 266