Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3013g00001 ATGTTACAGAATATGTCACTACTACTCGTCTTCTGTACTCTCTATTGTTTGCCATTCATGTTACAAGGATCAAATCAACATGAAAGAAAGCCTTACATTGTATACATGGGAGAATTGCCATTGGCTAGAACCTATGCCCCGGAAGACCACCACCTCAACTTGCTAGAAGCTACAATTGGAGACCACCAGTTAGCCAGAGAATCCAAAATACATAGCTACGGAAAGAGCTTCAATGGATTTGTTGCAAGACTTTTGCCATATGAAGCAAAGAAACTGCTACAGGAGGAGAATGTGGTATCTGTGTTTCCAAATACACACAGCAGAATACACACAACAAGGTCATGGGATTTTCTGGGAATGCCCCTAAAAGTGACCAGACGACACTCCAAAATAGAGAGCAATATCATTGTTGGTCTGTTAGACACAGGAATTTCGCTTGATTGCCCCAGTTTCAACGATACGGGGTATGGGCCTCCTCCAAGCACATGGAAGGGCAAATGTATAACAGGAGCCAATTTCACAGGATGTAACAACAAGGTGATAGGGGCAAAATACTTCAACCTAGAACAGACCGCTTCCACGTCGGAGGACAACAATCTTAGTCCGGCAGACGAGGAGGGACACGGCACTCACACAGCGTCTACAGCAGCCGGCGTGGCGGTGAAGGGTGCGAACCTTTACGGCATTGGCCGAGGCACGGCACGTGGTGGTGTGCCATCAGCACGCATAGCTGTGTACAAAGTGTGTTGGGGGAGTAGTGGGTGCAGTGACATGGACATGCTAGCTGCTTTTGATGAGGCCATAGCTGATGGTGTTAACTTAATATCAGTGTCTATTGGAGGGACACCTAGGCCGTTTTTTAGTGATCCTATGGCTATTGGATCATTTCATGCTATGAAGAGAGGGATTCTAACCTCTTGCTCCGCTGGTAATGATGGTCCTTCCACTATGACCGTTGAAAATGTGGCTCCATGGATTTTGACGGTGGCCGCTTCCGCCATTGATAGGCAGTTCACGACGGTGGTATCCCTCGGTGATGGCAAGAAAGTTGCAGGAATGTCAATTAATACCTTTTCCCCTAAGAAAAATATGTACCCGTTGATTACTGGAGCCCTTGCTTCCAACGTTACCGGAGACAGCTATGGCAATGCCAGTGCTTGTGATTATGGGACTCTAAGCAAGGACAAGGTAATGGGTAGGATTGTATACTGCCTTGGCACGGGAAGCCAGGACTACGTCATCAATGAATTAGGTGGAGCAGGAACCATTATGAGTGTTGTAGAGCAATCAGACTATTCCACAACCACAATTATTCCAGGTGTCTTTGTTGATGCCACCACTGAAGGCAAAACCATTGACCTCTACATCAATTCCACCAAGAATGCACAAGCTATAATACACAAGACCATAAGTACAAGAAGCCCTGGTTCGTATATTGCTTCTTTCTCATCAAGAGGTCCTCAATTCATCACCTTCAACATCCTAAAGCCTGACTTGGCTGCTCCAGGACTGGATATTCTAGCTGGTTATTCCACATTGGCATCAATAACAGGTTACTCTGAAGACAACCGTCACAACTTTTTTAATATAATATCAGGAACTTCTATGGCATGTCCACATGCTGCTGGTGCTGCTGCCTATGTCAAATCCTTCCACCCTCACTGGAGTCCTGCTGCTATCAAATCTGCTCTCATGACCACTGCCACTCCCATGAGAATCAAAGATGAAACGGCAGAGCTGGGATCTGGGTCAGGACAGATCAACCCAGTAAGAGCATTGGATCCTGGCTTAATTTATGACATTAATATGAACTCCTATATTGCCTTCTTATGCAAGGAAGGTTACAATAGCACCAGCATTGGTATACTAATTGGAAGCAAAGGCTTTGATTGCTCCAGCATTAGCTCTGCACAAGGCACTGATGGAATCAATTACCCTTCTATGCATACTCAGATCATGCAAGCAAATTCTAGCATTTCTGCAATCTTTTATCGGAATGTGACCAATGTAGGATTTGCAAACTCAACTTACAAGGCTAAAGTCACAGCACCAAAGGGTCTTTCCATTGTGGTTGTCCCAGACACATTGCAGTTTAGTAGGTTGAACCAAGAGCTCTCGTTCAAGGTTGCTCTGAAGGGGCCTTCAATGCCGAAAGAGACAAAGATATTATCAGGATCACTTGAATGGAATGACTCTAAACACAGTGTTAGAAGCCCCATAGTTGTCTATAAACCTATGAGGTGA 2244 0.4514 MLQNMSLLLVFCTLYCLPFMLQGSNQHERKPYIVYMGELPLARTYAPEDHHLNLLEATIGDHQLARESKIHSYGKSFNGFVARLLPYEAKKLLQEENVVSVFPNTHSRIHTTRSWDFLGMPLKVTRRHSKIESNIIVGLLDTGISLDCPSFNDTGYGPPPSTWKGKCITGANFTGCNNKVIGAKYFNLEQTASTSEDNNLSPADEEGHGTHTASTAAGVAVKGANLYGIGRGTARGGVPSARIAVYKVCWGSSGCSDMDMLAAFDEAIADGVNLISVSIGGTPRPFFSDPMAIGSFHAMKRGILTSCSAGNDGPSTMTVENVAPWILTVAASAIDRQFTTVVSLGDGKKVAGMSINTFSPKKNMYPLITGALASNVTGDSYGNASACDYGTLSKDKVMGRIVYCLGTGSQDYVINELGGAGTIMSVVEQSDYSTTTIIPGVFVDATTEGKTIDLYINSTKNAQAIIHKTISTRSPGSYIASFSSRGPQFITFNILKPDLAAPGLDILAGYSTLASITGYSEDNRHNFFNIISGTSMACPHAAGAAAYVKSFHPHWSPAAIKSALMTTATPMRIKDETAELGSGSGQINPVRALDPGLIYDINMNSYIAFLCKEGYNSTSIGILIGSKGFDCSSISSAQGTDGINYPSMHTQIMQANSSISAIFYRNVTNVGFANSTYKAKVTAPKGLSIVVVPDTLQFSRLNQELSFKVALKGPSMPKETKILSGSLEWNDSKHSVRSPIVVYKPMR 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3013g00001 747 Gene3D - 335 472 - -
Gabi3013g00001 747 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
Gabi3013g00001 747 Gene3D - 610 744 - -
Gabi3013g00001 747 Pfam Subtilase family 133 576 IPR000209 GO:0006508|GO:0008236
Gabi3013g00001 747 CDD Peptidases_S8_3 109 569 IPR034197 -
Gabi3013g00001 747 Pfam Fibronectin type-III domain 643 742 IPR041469 -
Gabi3013g00001 747 Pfam Peptidase inhibitor I9 32 110 IPR010259 -
Gabi3013g00001 747 MobiDBLite consensus disorder prediction 194 214 - -
Gabi3013g00001 747 SUPERFAMILY Subtilisin-like 131 597 IPR036852 GO:0004252|GO:0006508
Gabi3013g00001 747 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 137 147 IPR023827 -
Gabi3013g00001 747 FunFam Subtilisin-like protease SBT1.5 134 350 - -
Gabi3013g00001 747 ProSiteProfiles Serine proteases, subtilase domain profile. 114 593 - -
Gabi3013g00001 747 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Gabi3013g00001 747 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Gabi3013g00001 747 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Gabi3013g00001 747 CDD PA_subtilisin_like 341 466 - -
Gabi3013g00001 747 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 742 IPR045051 -
Gabi3013g00001 747 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 110 IPR037045 -
Gabi3013g00001 747 Gene3D Peptidase S8/S53 domain 134 606 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3013g00001 Gabi-Chr3013 11041 17407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3013g00001 7 567 Subtilisin-like Serine Gene Family AT5G03620 59.930 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3013g00001 - - gmx:100816428 1176.39