Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3011g00036 ATGGAGGAGGATGAGATTCAAGCACAGGCGTGTAAGTTCCCAAGAGTTGGAAATGGTAGAAACCAGTCAAACAAGATCATAGGTTCCAGCAGAAGAGGGATTGAGCAATACCAAGATGAGGAAGAAGATGGAGAAGTGAGAAGGAGAGGAAGTACTTGTGGTGGCAGCGATGGAAGCACAAACCTTTTCCAAAGTGGTTGGCACCACTCTTCAAGAATAGTAAGGGTATCTCGAGCATCTGGTGGCAAAGACAGGCACAGCAAGGTCATGACTTCAAAGGGTTTAAGAGACCGAAGGGTTCGGCTCTCGGTGACCACAGCTATTCAATTCTATGACCTTCAAGATCGCCTTGGTTATGACCAACCCAGTAAAGCTGTTGAATGGTTAATCAAAGCTGCAGCAGATTCCATTCATGAACTCCCTTCTCTCAACAACACATTCCCCGATACGCCAAAGCAACCTAGTGGTGAGAAAAGGCCAAGTGATATACAAGGCTTTGATGAGGTAGATGGAGATATGATCAACTACCACCATCAGAACCAAAGCCAGAACCTTTCTTTGTCTAAGTCTGCTTGTAGCAGCACTTCGGAGACAAGCAAAGGCTCTGGCTTATCCCTCTCACGGTCTGAGATCCGTGTGAACCGTGTCAAGGCAAGGGAGAGAGCAAGGGAAAGAGCAGCAAAAGAAAAAAAGAAAGAGAAGGAGATCAAAGAGAACGAGTCTCGCATTGCACATCATCATCATCACCACCACCCCATGTCTCAAACTACTTCCTTCACTGAGCTCCTAGCTAGTGGGATTGGTAGTAGTACAATAACAGTTCCAACCACTACAAGTCCCAATGGTTCAGTTCATCAGATCCATGGTGGTGATGAGCCTAATCTATTCAACAAGGCAACAACAGCCATGGACTACTTTAACTCAGGCCTTCTGGTGGGACCTTCCTCTTCAAGAACCCATCAATCATCTTCTGATTTCTCAGGACAAATCCAACTGGGACATTCCCTTCAGGTTTCACCATTCACTGGTGAAAATGAAAACCACTCAGATCAACTTCAGCAGCACTTCTCTTTCATGCATGACCATAATAATCATCATCATCTTGTACCAGCTGTGGTTACTTCTTCTTCTCAGCCAAGCGTGAATGAATACAATCTCAACTTCACAATATCTTCGGGCCTTGCTGGTTATAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTTTTGCCTCACCCGCAGAGGTTTTCACCTTTAGACGGATCATCCAATGTACCTTTCTTCATAGGAGCTGCTCCACCTGCTGCTTCAACCATGGTCGACAACAATCACCACCTTCAGTTCTCACCAGTCTTCGATGGTCGCTTGCAACTCTGCTATGGCGACGCAACCCGGCATTCAGATCAGAAGGGGAAAGGCAAGAACTGA 1428 0.4629 MEEDEIQAQACKFPRVGNGRNQSNKIIGSSRRGIEQYQDEEEDGEVRRRGSTCGGSDGSTNLFQSGWHHSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADSIHELPSLNNTFPDTPKQPSGEKRPSDIQGFDEVDGDMINYHHQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARERAAKEKKKEKEIKENESRIAHHHHHHHPMSQTTSFTELLASGIGSSTITVPTTTSPNGSVHQIHGGDEPNLFNKATTAMDYFNSGLLVGPSSSRTHQSSSDFSGQIQLGHSLQVSPFTGENENHSDQLQQHFSFMHDHNNHHHLVPAVVTSSSQPSVNEYNLNFTISSGLAGYNRGTLQSNSPSLLPHPQRFSPLDGSSNVPFFIGAAPPAASTMVDNNHHLQFSPVFDGRLQLCYGDATRHSDQKGKGKN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3011g00036 475 MobiDBLite consensus disorder prediction 181 209 - -
Gabi3011g00036 475 ProSiteProfiles TCP domain profile. 82 140 IPR017887 -
Gabi3011g00036 475 MobiDBLite consensus disorder prediction 212 242 - -
Gabi3011g00036 475 Pfam TCP family transcription factor 81 232 IPR017887 -
Gabi3011g00036 475 MobiDBLite consensus disorder prediction 1 64 - -
Gabi3011g00036 475 ProSiteProfiles R domain profile. 212 230 IPR017888 -
Gabi3011g00036 475 MobiDBLite consensus disorder prediction 34 50 - -
Gabi3011g00036 475 MobiDBLite consensus disorder prediction 141 167 - -
Gabi3011g00036 475 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 55 403 IPR005333 GO:0003700
Gabi3011g00036 475 Coils Coil 219 239 - -
Gabi3011g00036 475 MobiDBLite consensus disorder prediction 181 255 - -
Gabi3011g00036 475 MobiDBLite consensus disorder prediction 16 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3011g00036 Gabi-Chr3011 359225 369099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3011g00036 65 475 TCP Transcription Factor Family AT4G18390 44.266 1.57e-73 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi3011g00036 TCP 9.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3011g00036 - - gmx:100806032 505.368