Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3011g00036 | ATGGAGGAGGATGAGATTCAAGCACAGGCGTGTAAGTTCCCAAGAGTTGGAAATGGTAGAAACCAGTCAAACAAGATCATAGGTTCCAGCAGAAGAGGGATTGAGCAATACCAAGATGAGGAAGAAGATGGAGAAGTGAGAAGGAGAGGAAGTACTTGTGGTGGCAGCGATGGAAGCACAAACCTTTTCCAAAGTGGTTGGCACCACTCTTCAAGAATAGTAAGGGTATCTCGAGCATCTGGTGGCAAAGACAGGCACAGCAAGGTCATGACTTCAAAGGGTTTAAGAGACCGAAGGGTTCGGCTCTCGGTGACCACAGCTATTCAATTCTATGACCTTCAAGATCGCCTTGGTTATGACCAACCCAGTAAAGCTGTTGAATGGTTAATCAAAGCTGCAGCAGATTCCATTCATGAACTCCCTTCTCTCAACAACACATTCCCCGATACGCCAAAGCAACCTAGTGGTGAGAAAAGGCCAAGTGATATACAAGGCTTTGATGAGGTAGATGGAGATATGATCAACTACCACCATCAGAACCAAAGCCAGAACCTTTCTTTGTCTAAGTCTGCTTGTAGCAGCACTTCGGAGACAAGCAAAGGCTCTGGCTTATCCCTCTCACGGTCTGAGATCCGTGTGAACCGTGTCAAGGCAAGGGAGAGAGCAAGGGAAAGAGCAGCAAAAGAAAAAAAGAAAGAGAAGGAGATCAAAGAGAACGAGTCTCGCATTGCACATCATCATCATCACCACCACCCCATGTCTCAAACTACTTCCTTCACTGAGCTCCTAGCTAGTGGGATTGGTAGTAGTACAATAACAGTTCCAACCACTACAAGTCCCAATGGTTCAGTTCATCAGATCCATGGTGGTGATGAGCCTAATCTATTCAACAAGGCAACAACAGCCATGGACTACTTTAACTCAGGCCTTCTGGTGGGACCTTCCTCTTCAAGAACCCATCAATCATCTTCTGATTTCTCAGGACAAATCCAACTGGGACATTCCCTTCAGGTTTCACCATTCACTGGTGAAAATGAAAACCACTCAGATCAACTTCAGCAGCACTTCTCTTTCATGCATGACCATAATAATCATCATCATCTTGTACCAGCTGTGGTTACTTCTTCTTCTCAGCCAAGCGTGAATGAATACAATCTCAACTTCACAATATCTTCGGGCCTTGCTGGTTATAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTTTTGCCTCACCCGCAGAGGTTTTCACCTTTAGACGGATCATCCAATGTACCTTTCTTCATAGGAGCTGCTCCACCTGCTGCTTCAACCATGGTCGACAACAATCACCACCTTCAGTTCTCACCAGTCTTCGATGGTCGCTTGCAACTCTGCTATGGCGACGCAACCCGGCATTCAGATCAGAAGGGGAAAGGCAAGAACTGA | 1428 | 0.4629 | MEEDEIQAQACKFPRVGNGRNQSNKIIGSSRRGIEQYQDEEEDGEVRRRGSTCGGSDGSTNLFQSGWHHSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADSIHELPSLNNTFPDTPKQPSGEKRPSDIQGFDEVDGDMINYHHQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARERAAKEKKKEKEIKENESRIAHHHHHHHPMSQTTSFTELLASGIGSSTITVPTTTSPNGSVHQIHGGDEPNLFNKATTAMDYFNSGLLVGPSSSRTHQSSSDFSGQIQLGHSLQVSPFTGENENHSDQLQQHFSFMHDHNNHHHLVPAVVTSSSQPSVNEYNLNFTISSGLAGYNRGTLQSNSPSLLPHPQRFSPLDGSSNVPFFIGAAPPAASTMVDNNHHLQFSPVFDGRLQLCYGDATRHSDQKGKGKN | 475 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3011g00036 | 475 | MobiDBLite | consensus disorder prediction | 181 | 209 | - | - | |
Gabi3011g00036 | 475 | ProSiteProfiles | TCP domain profile. | 82 | 140 | IPR017887 | - | |
Gabi3011g00036 | 475 | MobiDBLite | consensus disorder prediction | 212 | 242 | - | - | |
Gabi3011g00036 | 475 | Pfam | TCP family transcription factor | 81 | 232 | IPR017887 | - | |
Gabi3011g00036 | 475 | MobiDBLite | consensus disorder prediction | 1 | 64 | - | - | |
Gabi3011g00036 | 475 | ProSiteProfiles | R domain profile. | 212 | 230 | IPR017888 | - | |
Gabi3011g00036 | 475 | MobiDBLite | consensus disorder prediction | 34 | 50 | - | - | |
Gabi3011g00036 | 475 | MobiDBLite | consensus disorder prediction | 141 | 167 | - | - | |
Gabi3011g00036 | 475 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 55 | 403 | IPR005333 | GO:0003700 | |
Gabi3011g00036 | 475 | Coils | Coil | 219 | 239 | - | - | |
Gabi3011g00036 | 475 | MobiDBLite | consensus disorder prediction | 181 | 255 | - | - | |
Gabi3011g00036 | 475 | MobiDBLite | consensus disorder prediction | 16 | 31 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3011g00036 | Gabi-Chr3011 | 359225 | 369099 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3011g00036 | 65 | 475 | TCP Transcription Factor Family | AT4G18390 | 44.266 | 1.57e-73 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | TCP | Gabi3011g00036 | TCP | 9.2e-42 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3011g00036 | - | - | gmx:100806032 | 505.368 |