Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3011g00035 ATGTCCCGAGAGGCGTGCCAACATATTGTCAAAAATATTTTTTTCTTGGATGAATCCCATCATGAAACTAGGATACGAAAGACCACTTACAGAGAAAGATATATGGAAATTAGATACTTGGGATCAGACAGAGACACTGAACAAAAGAGATGTTGGGCTGAGGAGTCTCAGAAGTCAAAACCTTGGCTTTTAAGAGCATTAAATGCATGCCTTGGAGGAAGGTTTTGGTGGGGAGGCTTTTGGAAGATTGGCAATGATATTTCCCAATTTCTGGGCCCACTTATATTGAATCAACTTCTACAGTCTATGCAAAATGGTGATCCAGCCTGGATTGGCTACATTTTTGCCTTCTCAATATTTGTCGGAGTGGTCTTTGGGGTGTTATGTGAAGCTCAATATTTCCAGAATGTCATACGTGTTGGTTTCCAGCTAAGATCAACTCTGGTGGCTGCTGTATTTCGTAAGTCTCTAAGGCTTACTCATGAAGCCCGAAAGCAATTTGCTGCTGGAAAAATTACGAACTTGATGACGACTGATGCTGAGGCACTTCAGCAAATATGCCAGTCACTTCACACTTTGTGGTCAGCTCCATTTCGAATTGTTATTGCTATGGTTCTTCTTTACCAACAACTAGGCGTTGCTTCCCTTCTTGGTGCTTTGATGCTAGTTTTTTTGTTTCCATTACAGACATTTATCATCAGCAGAATGCAGAAGTATACTAAGGAAGGATTACAACGTACAGACAAGAGAATTGGTCTCATGAATGAAATTTTGGCTGCTATGGACACCGTAAAATGTTATGCATGGGAGAGTAGTTTTCAGTCCAAATTGCAGAGTGTCCGAAATGACGAATTATCATGGTTTCGAAAAGCATCATTACTTGGAGCGTGTAATGGATTTATACTGAACAGCATTCCAGTTGTTGTAACTGTGGTTTCATTTGGAATGTTCACCATGCTTGGAGGGGATTTGACACCTGCAAGAGCTTTCACATCGCTTTCTCTGTTTGCTGTCCTTCGATTTCCTCTCTTCATGCTTCCTAATATTATAACTCAGGTGGTTAATGCAAATGTATCCTTGAAGCGTCTGGAGGATATGCTCTTAGCAGAAGAGAGATTACTTCTACCAAATCCACCTCTTGAGCCAAGTTTACCAGCCATCTCGATCAAGAATGGATGCTTTTCTTGGGATGCAAAGGCAGAGAGGGCCACATTGTCAAACATAAATTTGGATATACCTGTTGGTAGCCTAGTTGCAGTTGTTGGCAGTACAGGAGAAGGGAAGACATCACTCGTATCTGCAATGCTTGGAGAACTTCCTGCAATTGCAGATTCAACTGTTGTTATGAGAGGAACAGTTGCTTATGTACCCCAAGTTTCCTGGATTTTTAATGCAACTGTACGGGATAATGTTTTGTTTGGTTCTGTCTTTGACCCGACAAGATATGAAAGGGCAATAGATGTCACTGAACTGCAGCATGACCTTGATTTACTGCCTGGCGGCGATCTTACTGAAATTGGTGAAAGAGGGGTAAACATTAGCGGTGGTCAGAAGCAAAGAGTATCTATGGCTAGAGCTGTCTACTCCAATTCTGATGTGTACATTTTTGATGACCCCCTAAGTGCTCTGGATGCGCATGTGGCTAGACAGGTTTTTGATAAATGCATCAAGGGAGAATTGAGAGGCAGGACCCGGGTTCTTGTTACAAATCAGCTGCATTTCCTTTCACAGGTTGATAGAATCATTTTGGTCCATGACGGTACGGTGAAGGAGGAGGGAACTTTTGAGGAGCTCACTAACCAGGGACCGTTGTTCCAAAAGCTTATGGAAAATGCCGGAAAGATGGAGGAGTATGAAGAAGAAAAGGAAGATATTGAAACCACTGATCAGAAGTCCTCTTCGAAACAAGTGGCCAATGGAGCAGTTAATGATGCAAAGATTGGAAGTAAACCAAAAGAAGGAAAATCTATCCTTATTAAACAGGAAGAACGGGAAACAGGTGTTGTAAGCATGAAAGTTCTACTAAGGTACCAGAATGCATTAGGAGGCTTTTTGGTGGTTCTAGTACTCTTTTCATGCTATTTCTTCACTGAAGTGTTACGAGTGTCAAGTAGCACATGGTTAAGCTATTGGACTGATCAGAGTTCTTCCGTGGGTTATAATCCTGGCTTCTACAATCTGATATATGCAGCTCTATCAATTGGTCAGGTTTTGGTGACTTTGACAAATTCTTATTGGTTAATCATAACAAGTCTTCATGCTGCCAGAAGGTTGCACGAAGCCATGCTTCACTCCATATTACGATCTCCTATGGTTTTTTTCCATACAAATCCACTTGGAAGGATTATCAACAGGTTTGCGAAGGATCTAGGTGACATTGATCGTAATGTTGCCCCATTTGTGAATATGTTTCTGGGCCAAGTGTCCCAGCTTCTTTCAACATTCATCCTGATAGGGATTGTCAGCACAATGTCCTTGTGGGCCATAATGCCATTGTTGGTATTGTTTTATGGAGCATATCTATACTATCAGAGCACAGCCCGTGAAGTGAAGCGCTTAGATTCAATTAGCAGATCTCCTGTTTATGCACAATTTGGAGAAGCACTTAATGGTCTATCAACAATTCGTGCTTACAAAGCTTATGATCGAATGGCTGACATAAATGGGAAATCCATGGACAACAATATACGATTCACTCTTTTGATCATGAGTGGAAACCGATGGCTTGCAATCCGATTGGAAACTTTGGGAGGCCTCATGATATGGTTTACTGCAACCTTTGCTGTAATGCAGAATGGTAGGGCAGAGAACCAGCAGGAATTCGCATCCACTATGGGATTACTACTTAGTTATGCTTTGAATATTACTAGTTTGCTGACTGGTGTGCTCAGGCTTGCAAGTTTGGCTGAGAATAGTTTAAATGCAGTTGAGCGGATTGGCACTTATATAGATTTGCCTTCAGAGGCTCCATCTATCATTGATGATAATCGCCCTCCTCCTGGTTGGCCCTCATCGGGATCAATCAGATTCGAAGATGTTGTTCTTCGTTACAGGCCTGAGCTTCCCCCTGTCCTCCATAGCTTGTCTTTCACAATTTTTCCTAGTGATAAGGTGGGCATTGTTGGGAGGACAGGAGCAGGAAAATCTAGCATGCTTAATGCTTTATTTCGAATTGTGGAATTGGAAAGGGGAAGAATATTAATTGATGATTGTGATATTGCAAAGTTTGGGCTTGCGGATTTACGTAAAGTTCTTGGCATTATCCCACAATCTCCTGTTCTCTTTTCAGGAACTGTGAGATTCAATCTTGATCCATTTAATGAACACAATGATCCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATACGGAGGAATTCTTTGGGGCTGGATGCTGAGGTGTCTGAGGCAGGTGAGAACTTTAGCGTTGGACAGAGGCAACTATTGAGTCTTGCCCGGGCTTTATTGCGGAGATCGAAGATATTAGTACTTGACGAGGCAACTGCAGCAGTTGATGTTAGAACAGATGCACTCATTCAGAAAACAATTCGAGAGGAATTTAAATCTTGTACAATGCTCATTATTGCTCATCGCCTTAACACCATTATTGATTGCGATCGGATTATTTTGCTTGATGGTGGTAAGGTTCTTGAATATGATACCCCTGAGGAGCTGCTGTCAAATGAAGGTAGTGCTTTCTCTAAAATGGTGCAAAGCACAGGAGCCGCAAATGCCCAATACTTACGCAGCTTAGCACTTGGGGAGAAATCAGCAAGAGAAGAGAACAGGCATCTAGATGGCCAGAGAAAATGGCTGGCTTCTTCTCGGTGGGCTGCTGCAGCACAATTTGCTCTTGCTGTCAGTCTCACCTCATCCCAAAATGACTTGCAACGATTGGATGTAGAAGACGAGAACAGTATTCTCAAGAAGACAAAGGATGCTCTGATTACTTTACAGGGGGTTTTGGAAAGGAAGCATGATAAAGAAATTGAGGAATCTTTAGACCAGCGCCAAATATCCCCACAGGGATGGTGGTCATCGCTTTACAAGATGATTGAAGGTCTTGCTATGATGAGCAGACTGGCGAGGAACAGGCTCCATCAATCAGACTACGGTTTTGAGGACAGATCAATTAACTTTGATCAAGTTGATATGTAG 4170 0.4235 MSREACQHIVKNIFFLDESHHETRIRKTTYRERYMEIRYLGSDRDTEQKRCWAEESQKSKPWLLRALNACLGGRFWWGGFWKIGNDISQFLGPLILNQLLQSMQNGDPAWIGYIFAFSIFVGVVFGVLCEAQYFQNVIRVGFQLRSTLVAAVFRKSLRLTHEARKQFAAGKITNLMTTDAEALQQICQSLHTLWSAPFRIVIAMVLLYQQLGVASLLGALMLVFLFPLQTFIISRMQKYTKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSKLQSVRNDELSWFRKASLLGACNGFILNSIPVVVTVVSFGMFTMLGGDLTPARAFTSLSLFAVLRFPLFMLPNIITQVVNANVSLKRLEDMLLAEERLLLPNPPLEPSLPAISIKNGCFSWDAKAERATLSNINLDIPVGSLVAVVGSTGEGKTSLVSAMLGELPAIADSTVVMRGTVAYVPQVSWIFNATVRDNVLFGSVFDPTRYERAIDVTELQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVARQVFDKCIKGELRGRTRVLVTNQLHFLSQVDRIILVHDGTVKEEGTFEELTNQGPLFQKLMENAGKMEEYEEEKEDIETTDQKSSSKQVANGAVNDAKIGSKPKEGKSILIKQEERETGVVSMKVLLRYQNALGGFLVVLVLFSCYFFTEVLRVSSSTWLSYWTDQSSSVGYNPGFYNLIYAALSIGQVLVTLTNSYWLIITSLHAARRLHEAMLHSILRSPMVFFHTNPLGRIINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFILIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDNNIRFTLLIMSGNRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVLRLASLAENSLNAVERIGTYIDLPSEAPSIIDDNRPPPGWPSSGSIRFEDVVLRYRPELPPVLHSLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELERGRILIDDCDIAKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDPDLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRIILLDGGKVLEYDTPEELLSNEGSAFSKMVQSTGAANAQYLRSLALGEKSAREENRHLDGQRKWLASSRWAAAAQFALAVSLTSSQNDLQRLDVEDENSILKKTKDALITLQGVLERKHDKEIEESLDQRQISPQGWWSSLYKMIEGLAMMSRLARNRLHQSDYGFEDRSINFDQVDM 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3011g00035 1389 CDD ABC_6TM_ABCC_D2 687 983 IPR044726 GO:0140359
Gabi3011g00035 1389 FunFam ABC transporter C family member 2 651 989 - -
Gabi3011g00035 1389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 998 1239 IPR027417 -
Gabi3011g00035 1389 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 387 611 IPR003439 GO:0005524
Gabi3011g00035 1389 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 688 971 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi3011g00035 1389 SUPERFAMILY ABC transporter transmembrane region 60 363 IPR036640 GO:0005524|GO:0016020
Gabi3011g00035 1389 Coils Coil 608 635 - -
Gabi3011g00035 1389 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1008 1242 IPR003439 GO:0005524
Gabi3011g00035 1389 CDD ABCC_MRP_domain2 1006 1226 - -
Gabi3011g00035 1389 Pfam ABC transporter 1025 1173 IPR003439 GO:0005524
Gabi3011g00035 1389 ProSitePatterns ABC transporters family signature. 1145 1159 IPR017871 GO:0005524|GO:0016887
Gabi3011g00035 1389 Pfam ABC transporter 405 540 IPR003439 GO:0005524
Gabi3011g00035 1389 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 45 1248 - -
Gabi3011g00035 1389 CDD ABCC_MRP_domain1 387 588 - -
Gabi3011g00035 1389 FunFam Multidrug resistance-associated protein member 4 992 1244 - -
Gabi3011g00035 1389 SMART AAA_5 1034 1227 IPR003593 GO:0016887
Gabi3011g00035 1389 SMART AAA_5 414 588 IPR003593 GO:0016887
Gabi3011g00035 1389 Gene3D - 381 638 IPR027417 -
Gabi3011g00035 1389 ProSitePatterns ABC transporters family signature. 513 527 IPR017871 GO:0005524|GO:0016887
Gabi3011g00035 1389 Gene3D - 991 1244 IPR027417 -
Gabi3011g00035 1389 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 76 355 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi3011g00035 1389 FunFam ABC transporter C family member 2 51 372 - -
Gabi3011g00035 1389 Pfam ABC transporter transmembrane region 688 931 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi3011g00035 1389 Pfam ABC transporter transmembrane region 79 343 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi3011g00035 1389 SUPERFAMILY ABC transporter transmembrane region 687 988 IPR036640 GO:0005524|GO:0016020
Gabi3011g00035 1389 Gene3D ABC transporter type 1, transmembrane domain 43 372 IPR036640 GO:0005524|GO:0016020
Gabi3011g00035 1389 Gene3D ABC transporter type 1, transmembrane domain 651 989 IPR036640 GO:0005524|GO:0016020
Gabi3011g00035 1389 CDD ABC_6TM_ABCC_D1 77 363 IPR044746 GO:0140359
Gabi3011g00035 1389 FunFam ABC transporter C family member 2 381 627 - -
Gabi3011g00035 1389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 382 610 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3011g00035 Gabi-Chr3011 300722 329203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3011g00035 1005 1248 Calmodulin-binding Proteins AT2G36910 31.452 1.04e-29 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3011g00035 - - gmx:100795004 2332.75