Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3011g00034 ATGGCTTTTGAGCCATTGGTTTGGTATTGTCGGCCTGTTGCAAATGGAGTATGGACAAGAGCGGTCCAGAATGCCTTTGGTCCTTACACTCCTTGTGCAGTTGACTCTCTGGTGATCGCCATTTCTTATTTGGTACTTCTAGGCCTGTGCATCTATCGCATGTGGTTGATTAAGAAGGATTTCAAAGCCAAGAGATTCCGTTTAAGGTCAAACCTCTATAATTATTTTCTGGGGTTGTTAGCTGCTTATTGTGTGGCAGAGCCATTATACAGATTGATCATGGGAATATCAGTCCTAAATTTAGATGGGCAGACTTTTCTTGCCCCATTTGAGATAATTTCACTGATCATTGAGGCTCTTGCTTGGTGCTCTATGCTGATTTTGATTGGGATCGAAACTAAAGTCTACATCCATGAATTTCGGTGGTTTGTCAGATTTGGTTTGATTTATGCTATTGTAGGGGATGCTGTTATGTTCAATCTCATCATTTCTGTGAAGGAGTTATATGGCAGATCTGTGCTGTATTTGTACATCAGCGAGGTGGTTTGCCAGGTTTTGTTTGGAATACTATTGCTTGTGTACATTCCTACGTTGGATCCTTATCCAGGTTATACCCCCATTGGGAGTGAAATGGTTACTGATGCTGCATATGATGAACTCCCCAGAGGAGAGCTGATATGTCCCGAGAGGCGTGCCAACATATTGTCAAAAATATTTTTTTCTTGGATGAATCCCATCATGAAACTAGGATACGAAAGACCACTTACAGAGAAAGATATATGGAAATTAGATACTTGGGATCAGACAGAGACACTGAACAAAAGGTTCCAGAGATGTTGGGCTGAGGAGTCTCAGAAGTCAAAACCTTGGCTTTTAAGAGCATTAAATGCATGCCTTGGAGGAAGGTTTTGGTGGGGAGGCTTTTGGAAGATTGGCAATGATATTTCCCAATTTCTGGGCCCACTTATATTGAATCAACTTCTACAGTCTATGCAAAATGGTGATCCAGCCTGGATTGGCTACATTTTTGCCTTCTCAATATTTGTCGGAGTGGTCTTTGGGGTGTTATGTGAAGCTCAATATTTCCAGAATGTCATACGTGTTGGTTTCCAGCTAAGATCAACTCTGGTGGCTGCTGTATTTCGTAAGTCTCTAAGGCTTACTCATGAAGCCCGAAAGCAATTTGCTGCTGGAAAAATTACGAACTTGATGACGACTGATGCTGAGGCACTTCAGCAAATATGCCAGTCACTTCACACTTTGTGGTCAGCTCCATTTCGAATTGTTATTGCTATGGTTCTTCTTTACCAACAACTAGGCGTTGCTTCCCTTCTTGGTGCTTTGATGCTAGTTTTTTTGTTTCCATTACAGACATTTATCATCAGCAGAATGCAGAAGTATACTAAGGAAGGATTACAACGTACAGACAAGAGAATTGGTCTCATGAATGAAATTTTGGCTGCTATGGACACCGTAAAATGTTATGCATGGGAGAGTAGTTTTCAGTCCAAATTGCAGAGTGTCCGAAATGACGAATTATCATGGTTTCGAAAAGCATCATTACTTGGAGCGTGTAATGGATTTATACTGAACAGCATTCCAGTTGTTGTAACTGTGGTTTCATTTGGAATGTTCACCATGCTTGGAGGGGATTTGACACCTGCAAGAGCTTTCACATCGCTTTCTCTGTTTGCTGTCCTTCGATTTCCTCTCTTCATGCTTCCTAATATTATAACTCAGGTGGTTAATGCAAATGTATCCTTGAAGCGTCTGGAGGATATGCTCTTAGCAGAAGAGAGATTACTTCTACCAAATCCACCTCTTGAGCCAAGTTTACCAGCCATCTCGATCAAGAATGGATGCTTTTCTTGGGATGCAAAGGCAGAGAGGGCCACATTGTCAAACATAAATTTGGATATACCTGTTGGTAGCCTAGTTGCAGTTGTTGGCAGTACAGGAGAAGGGAAGACATCACTCGTATCTGCAATGCTTGGAGAACTTCCTGCAATTGCAGATTCAACTGTTGTTATGAGAGGAACAGTTGCTTATGTACCCCAAGTTTCCTGGATTTTTAATGCAACTGTACGGGATAATGTTTTGTTTGGTTCTGTCTTTGACCCGACAAGATATGAAAGGGCAATAGATGTCACTGAACTGCAGCATGACCTTGATTTACTGCCTGGCGGCGATCTTACTGAAATTGGTGAAAGAGGGGTAAACATTAGCGGTGGTCAGAAGCAAAGAGTATCTATGGCTAGAGCTGTCTACTCCAATTCTGATGTGTACATTTTTGATGACCCCCTAAGTGCTCTGGATGCGCATGTGGCTAGACAGGTTTTTGATAAATGCATCAAGGGAGAATTGAGAGGCAGGACCCGGGTTCTTGTTACAAATCAGCTGCATTTCCTTTCACAGGTTGATAGAATCATTTTGGTCCATGACGGTACGGTGAAGGAGGAGGGAACTTTTGAGGAGCTCACTAACCAGGGACCGTTGTTCCAAAAGCTTATGGAAAATGCCGGAAAGATGGAGGAGTATGAAGAAGAAAAGGAAGATATTGAAACCACTGATCAGAAGTCCTCTTCGAAACAAGTGGCCAATGGAGCAGTTAATGATGCAAAGATTGGAAGTAAACCAAAAGAAGGAAAATCTATCCTTATTAAACAGGAAGAACGGGAAACAGGTGTTGTAAGCATGAAAGTTCTACTAAGGTACCAGAATGCATTAGGAGGCTTTTTGGTGGTTCTAGTACTCTTTTCATGCTATTTCTTCACTGAAGTGTTACGAGTGTCAAGTAGCACATGGTTAAGCTATTGGACTGATCAGAGTTCTTCCGTGGGTTATAATCCTGGCTTCTACAATCTGATATATGCAGCTCTATCAATTGGTCAGGTTTTGGTGACTTTGACAAATTCTTATTGGTTAATCATAACAAGTCTTCATGCTGCCAGAAGGTTGCACGAAGCCATGCTTCACTCCATATTACGATCTCCTATGGTTTTTTTCCATACAAATCCACTTGGAAGGATTATCAACAGGTTTGCGAAGGATCTAGGTGACATTGATCGTAATGTTGCCCCATTTGTGAATATGTTTCTGGGCCAAGTGTCCCAGCTTCTTTCAACATTCATCCTGATAGGGATTGTCAGCACAATGTCCTTGTGGGCCATAATGCCATTGTTGGTATTGTTTTATGGAGCATATCTATACTATCAGAGCACAGCCCGTGAAGTGAAGCGCTTAGATTCAATTAGCAGATCTCCTGTTTATGCACAATTTGGAGAAGCACTTAATGGTCTATCAACAATTCGTGCTTACAAAGCTTATGATCGAATGGCTGACATAAATGGGAAATCCATGGACAACAATATACGATTCACTCTTTTGATCATGAGTGGAAACCGATGGCTTGCAATCCGATTGGAAACTTTGGGAGGCCTCATGATATGGTTTACTGCAACCTTTGCTGTAATGCAGAATGGTAGGGCAGAGAACCAGCAGGAATTCGCATCCACTATGGGATTACTACTTAGTTATGCTTTGAATATTACTAGTTTGCTGACTGGTGTGCTCAGGCTTGCAAGTTTGGCTGAGAATAGTTTAAATGCAGTTGAGCGGATTGGCACTTATATAGATTTGCCTTCAGAGGCTCCATCTATCATTGATGATAATCGCCCTCCTCCTGGTTGGCCCTCATCGGGATCAATCAGATTCGAAGATGTTGTTCTTCGTTACAGGCCTGAGCTTCCCCCTGTCCTCCATAGCTTGTCTTTCACAATTTTTCCTAGTGATAAGGTGGGCATTGTTGGGAGGACAGGAGCAGGAAAATCTAGCATGCTTAATGCTTTATTTCGAATTGTGGAATTGGAAAGGGGAAGAATATTAATTGATGATTGTGATATTGCAAAGTTTGGGCTTGCGGATTTACGTAAAGTTCTTGGCATTATCCCACAATCTCCTGTTCTCTTTTCAGGAACTGTGAGATTCAATCTTGATCCATTTAATGAACACAATGATCCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATACGGAGGAATTCTTTGGGGCTGGATGCTGAGGTGTCTGAGGCAGGTGAGAACTTTAGCGTTGGACAGAGGCAACTATTGAGTCTTGCCCGGGCTTTATTGCGGAGATCGAAGATATTAGTACTTGACGAGGCAACTGCAGCAGTTGATGTTAGAACAGATGCACTCATTCAGAAAACAATTCGAGAGGAATTTAAATCTTGTACAATGCTCATTATTGCTCATCGCCTTAACACCATTATTGATTGCGATCGGATTATTTTGCTTGATGGTGGTAAGGTTCTTGAATATGATACCCCTGAGGAGCTGCTGTCAAATGAAGGTAGTGCTTTCTCTAAAATGGTGCAAAGCACAGGAGCCGCAAATGCCCAATACTTACGCAGCTTAGCACTTGGGGAGAAATCAGCAAGAGAAGAGAACAGGCATCTAGATGGCCAGAGAAAATGGCTGGCTTCTTCTCGGTGGGCTGCTGCAGCACAATTTGCTCTTGCTGTCAGTCTCACCTCATCCCAAAATGACTTGCAACGATTGGATGTAGAAGACGAGAACAGTATTCTCAAGAAGACAAAGGATGCTCTGATTACTTTACAGGGGGTTTTGGAAAGGAAGCATGATAAAGAAATTGAGGAATCTTTAGACCAGCGCCAAATATCCCCACAGGGATGGTGGTCATCGCTTTACAAGATGATTGAAGGTCTTGCTATGATGAGCAGACTGGCGAGGAACAGGCTCCATCAATCAGACTACGGTTTTGAGGACAGATCAATTAACTTTGATCAAGTTGATATGTAG 4854 0.4232 MAFEPLVWYCRPVANGVWTRAVQNAFGPYTPCAVDSLVIAISYLVLLGLCIYRMWLIKKDFKAKRFRLRSNLYNYFLGLLAAYCVAEPLYRLIMGISVLNLDGQTFLAPFEIISLIIEALAWCSMLILIGIETKVYIHEFRWFVRFGLIYAIVGDAVMFNLIISVKELYGRSVLYLYISEVVCQVLFGILLLVYIPTLDPYPGYTPIGSEMVTDAAYDELPRGELICPERRANILSKIFFSWMNPIMKLGYERPLTEKDIWKLDTWDQTETLNKRFQRCWAEESQKSKPWLLRALNACLGGRFWWGGFWKIGNDISQFLGPLILNQLLQSMQNGDPAWIGYIFAFSIFVGVVFGVLCEAQYFQNVIRVGFQLRSTLVAAVFRKSLRLTHEARKQFAAGKITNLMTTDAEALQQICQSLHTLWSAPFRIVIAMVLLYQQLGVASLLGALMLVFLFPLQTFIISRMQKYTKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSKLQSVRNDELSWFRKASLLGACNGFILNSIPVVVTVVSFGMFTMLGGDLTPARAFTSLSLFAVLRFPLFMLPNIITQVVNANVSLKRLEDMLLAEERLLLPNPPLEPSLPAISIKNGCFSWDAKAERATLSNINLDIPVGSLVAVVGSTGEGKTSLVSAMLGELPAIADSTVVMRGTVAYVPQVSWIFNATVRDNVLFGSVFDPTRYERAIDVTELQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVARQVFDKCIKGELRGRTRVLVTNQLHFLSQVDRIILVHDGTVKEEGTFEELTNQGPLFQKLMENAGKMEEYEEEKEDIETTDQKSSSKQVANGAVNDAKIGSKPKEGKSILIKQEERETGVVSMKVLLRYQNALGGFLVVLVLFSCYFFTEVLRVSSSTWLSYWTDQSSSVGYNPGFYNLIYAALSIGQVLVTLTNSYWLIITSLHAARRLHEAMLHSILRSPMVFFHTNPLGRIINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFILIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDNNIRFTLLIMSGNRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVLRLASLAENSLNAVERIGTYIDLPSEAPSIIDDNRPPPGWPSSGSIRFEDVVLRYRPELPPVLHSLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELERGRILIDDCDIAKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDPDLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRIILLDGGKVLEYDTPEELLSNEGSAFSKMVQSTGAANAQYLRSLALGEKSAREENRHLDGQRKWLASSRWAAAAQFALAVSLTSSQNDLQRLDVEDENSILKKTKDALITLQGVLERKHDKEIEESLDQRQISPQGWWSSLYKMIEGLAMMSRLARNRLHQSDYGFEDRSINFDQVDM 1617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3011g00034 1617 Gene3D ABC transporter type 1, transmembrane domain 274 600 IPR036640 GO:0005524|GO:0016020
Gabi3011g00034 1617 Gene3D ABC transporter type 1, transmembrane domain 879 1217 IPR036640 GO:0005524|GO:0016020
Gabi3011g00034 1617 FunFam Multidrug resistance-associated protein member 4 1220 1472 - -
Gabi3011g00034 1617 SUPERFAMILY ABC transporter transmembrane region 915 1216 IPR036640 GO:0005524|GO:0016020
Gabi3011g00034 1617 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1476 - -
Gabi3011g00034 1617 SMART AAA_5 1262 1455 IPR003593 GO:0016887
Gabi3011g00034 1617 SMART AAA_5 642 816 IPR003593 GO:0016887
Gabi3011g00034 1617 ProSitePatterns ABC transporters family signature. 1373 1387 IPR017871 GO:0005524|GO:0016887
Gabi3011g00034 1617 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 839 IPR003439 GO:0005524
Gabi3011g00034 1617 CDD ABCC_MRP_domain1 615 816 - -
Gabi3011g00034 1617 Pfam ABC transporter transmembrane region 916 1159 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi3011g00034 1617 Pfam ABC transporter transmembrane region 307 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi3011g00034 1617 CDD ABC_6TM_ABCC_D1 305 591 IPR044746 GO:0140359
Gabi3011g00034 1617 Pfam ABC transporter 1253 1401 IPR003439 GO:0005524
Gabi3011g00034 1617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 610 838 IPR027417 -
Gabi3011g00034 1617 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524|GO:0016887
Gabi3011g00034 1617 Coils Coil 836 863 - -
Gabi3011g00034 1617 CDD ABCC_MRP_domain2 1234 1454 - -
Gabi3011g00034 1617 Pfam ABC transporter 633 768 IPR003439 GO:0005524
Gabi3011g00034 1617 SUPERFAMILY ABC transporter transmembrane region 288 591 IPR036640 GO:0005524|GO:0016020
Gabi3011g00034 1617 FunFam ABC transporter C family member 2 879 1217 - -
Gabi3011g00034 1617 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 916 1199 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi3011g00034 1617 Gene3D - 1219 1472 IPR027417 -
Gabi3011g00034 1617 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi3011g00034 1617 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1236 1470 IPR003439 GO:0005524
Gabi3011g00034 1617 FunFam ABC transporter C family member 2 279 600 - -
Gabi3011g00034 1617 Gene3D - 609 866 IPR027417 -
Gabi3011g00034 1617 FunFam ABC transporter C family member 2 609 855 - -
Gabi3011g00034 1617 CDD ABC_6TM_ABCC_D2 915 1211 IPR044726 GO:0140359
Gabi3011g00034 1617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1226 1467 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3011g00034 Gabi-Chr3011 300722 333361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3011g00034 1233 1476 Calmodulin-binding Proteins AT2G36910 31.452 1.01e-29 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3011g00034 - - gmx:100795004 2826.97