Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3011g00033 ATGTTAGAGAGTGGCCGTGATTCTGGTATGAGCTTGGAGACTCTCAATTCCACCCAGCGAACTTCCATGAGCAGCGAAAGCATTTGTAGCACCAGCTTCAGCCGTCTCTCCTTCGACCTCCTCCCAACCTCATCGCCCGAGAGTCTCTCCATCAAGCCTCACCGTTCCTCCGACTTTGCTTACTCCGCCATACGCTCCGCCACCTACCGCCGCAAGTCCGGCCTCACCTTCCGCGACTTCCACCTCCTCCGCCGAATCGGCGCCGGCGACATCGGCACCGTGTACCTCTGCCGCCTCCGCGACGGCACCGGCGACGAATCCGACGACGAAGAAACCGCCTGCTTCTACGCCATGAAGGTGGTGGACAAGGAGGCGGTGGCGCTGAAGAAGAAGGCGCAGAGAGCGGAAACGGAGAGGAAGATTCTGAAGATGCTGGACCACCCGTTCCTCCCTACGCTGTACGCAGAGTTCGAGGCATCTCATTTCTCTTGCATTGTGATGGAGTTTTGTTCCGGTGGGGACTTGCACTCCCTGCGCCACCGCCATCCTAACAAGCGTTTCTCTCTCTCCTCTGCAAGGTTTTACGCGGCTGAGGTACTGGTGGCATTGGAGTACCTCCACATGCTGGGAATCATCTACAGGGATTTAAAGCCGGAAAACGTGCTGGTTAGATCAGACGGTCACATCATGCTCTCTGATTTTGATCTCTCTCTATGCTCCGACGCAATCCCAGCCGTTGAATCACCAGATCCTGCATTACAACCTGAGTTATTACCCTACACCCGCCCCTACTCAACGCCCTTCTCCTGCCTCTCCAAGCGAGTCTTCCGGTCCAGGAAGGTCCAAACCCTGCAGTCGAACCGGCTCTTCGTTGCTGAACCTGTTGGGGCCCGGTCCTGCTCCTTCGTTGGGACCCACGAGTACGTGTCTCCGGAGGTGGCCTCCGGCAACTCTCACGGCAACGCCGTCGACTGGTGGTCCTTCGGGATATTCATCTACGAGCTGCTGTACGGCCGCACCCCGTTTGCGGGACCAACCAACGAGTCTACGCTGCGCAACATCTTAAAAAAGCCCCTCGCCTTCCCTACCACCACGCCCTCCAGCACGCTTGAGCTGCACGCGCGGGACCTGGTGTCTCGGTTGTTGAACAAGGACGCGAACCGCAGGCTCGGGTCTAAGCGAGGCGCTGCTGACGTCAAGAAGCACCCGTTCTTCGCAGGGCTCAACCTGGCGCTGATTCGGATGGTGATGCCGCCGGAGGTGCCGTGCCTGAGACGGCACAAAACGTCACCGTTGTTGCCCGTGAACGGCAACGGCAACAAACACTGCAGTAGTAGTAGTAGACAACAGCCAACGGCGTCGTTTGATTACTTTTGA 1377 0.5802 MLESGRDSGMSLETLNSTQRTSMSSESICSTSFSRLSFDLLPTSSPESLSIKPHRSSDFAYSAIRSATYRRKSGLTFRDFHLLRRIGAGDIGTVYLCRLRDGTGDESDDEETACFYAMKVVDKEAVALKKKAQRAETERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHRHPNKRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESPDPALQPELLPYTRPYSTPFSCLSKRVFRSRKVQTLQSNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYELLYGRTPFAGPTNESTLRNILKKPLAFPTTTPSSTLELHARDLVSRLLNKDANRRLGSKRGAADVKKHPFFAGLNLALIRMVMPPEVPCLRRHKTSPLLPVNGNGNKHCSSSSRQQPTASFDYF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3011g00033 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Gabi3011g00033 458 Gene3D Phosphorylase Kinase; domain 1 78 169 - -
Gabi3011g00033 458 FunFam protein kinase PINOID 170 238 - -
Gabi3011g00033 458 MobiDBLite consensus disorder prediction 1 23 - -
Gabi3011g00033 458 SMART serkin_6 80 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3011g00033 458 MobiDBLite consensus disorder prediction 433 458 - -
Gabi3011g00033 458 MobiDBLite consensus disorder prediction 432 458 - -
Gabi3011g00033 458 CDD STKc_phototropin_like 78 422 - -
Gabi3011g00033 458 Gene3D Transferase(Phosphotransferase) domain 1 298 423 - -
Gabi3011g00033 458 MobiDBLite consensus disorder prediction 9 23 - -
Gabi3011g00033 458 PANTHER FLIPPASE KINASE 1-RELATED 19 425 - -
Gabi3011g00033 458 ProSiteProfiles Protein kinase domain profile. 80 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3011g00033 458 Coils Coil 118 145 - -
Gabi3011g00033 458 FunFam serine/threonine-protein kinase D6PK-like 297 423 - -
Gabi3011g00033 458 SUPERFAMILY Protein kinase-like (PK-like) 59 425 IPR011009 -
Gabi3011g00033 458 Gene3D Transferase(Phosphotransferase) domain 1 170 237 - -
Gabi3011g00033 458 FunFam protein kinase PINOID 2 78 169 - -
Gabi3011g00033 458 Pfam Protein kinase domain 299 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3011g00033 458 Pfam Protein kinase domain 80 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3011g00033 Gabi-Chr3011 279985 281769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3011g00033 7 458 AGC Kinase Gene Family AT2G34650 66.154 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gabi3011g00033 Pkinase 2.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3011g00033 - - gmx:100795536 734.176