Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3011g00003 ATGCACAGAGAGAAATGGGAGAGGCCATTAAAAATGGCAAAGTCTAGTTCTAGTTTTAGTTATTCTGGTTTGGTTTATCATGGTGTTCTACTTCCCCTTCTTTTATTATTACATATTTTCTTTCCAATTGCTACATGCGGATCCTTAGTACAGTTCCTTCCTGGATTCGAGGGACCCCTTCCTTTTGTGCTTGAAACCGGGTATGTGGGAGTGGGTGAATCAGAGGATGTGCAAGCATTCTACTACTTCATTGAGTCAGAGAACAATCCAAAGGAGGATCCTCTCATGCTTTGGCTAACGGGTGGTCCTGGTTGCTCTGCCTTGTCTGGCCTTGTCTTTGAAATAGGTCCACTTGCATTTATAAAAGAGGATTACAATGGGAGCCTGCCTAATTTGGTCTTGAGGTCACATTCATGGACAAAGGTAAGTAGCATCATATTTGTAGATTTGCCTGTTTCCACGGGTTTCTCTTATGCCACAACCGAGTCTGCCGCTCAACGAAGTGACTGGAGACTAGTTCACCAAGTCCATCAATTTCTTAGGAAGTGGCTGATTGACCATCCAAAATTTCTGTCAAATGAGGTTTACATTGGTGGCGATTCATACTCTGGCATTCCTATTCCAGTCATTGTTCAAGAGATTTCACAAGGAAATGAAAATGGGGTCAAACCATGGATAAATCTCCAGGGATACCTGCTGGGAAATGCCGCAACAACTGGAAGGGAAAAAAACTATGAAATCCCCTTTTCTCATGGAATGGGACTTATTTGTGATGAACTATACGAGTCACTGCAAAAAAATTGTAAAGGAGAGTATGTAAGTGTAGACACCAAAAATTTACTCTGTTCAAGAGATATCCAGTCCTACAATGAGGCTACATCAGGAATTAATACGGCTCATATTTTGGACCCGTTATGTGAGTGGCTTGATACTAAAGTTTCTTGGAGGAGATCTCTAACTCAGAAATATCCCTGGAAGTACCTCAATAGCCATCTCAAATTGCCACCCTTAAACTGTCGGAGTTATGCATACTTCCTTTGCGGTTATTGGGCCAATGATGATAATGTTCGCAATGCACTGCACATACGCAAGGGAAGTACAGGGAAATGGCATCGTTGTACCTACGATATACCTAACAAGAAAGAAATTTTTAGCAGCTATGAGTATCATGTAAATCTTAGTAGAAAAGGCTATCGTTCACTGATATACAGTGGCGATCATGACATGACGATTCCTTTCTTGGCGACTCAAGCATGGGTAAGATCTTTGAACTACTCCATTGTGGATGATTGGAGGCAATGGTATACAAATGGCCAAGTTGCAGGATACACAAGGACTTACTCCAATCGGATGACATTTGCAACAGTGAAGGGTGGAGGGCACACAGCTCCAGAGTACAAGCCCGAAGAATGCTTTGCCATGTACAGTAGGTGGATATCTAATAGTGCTCTCTAG 1455 0.422 MHREKWERPLKMAKSSSSFSYSGLVYHGVLLPLLLLLHIFFPIATCGSLVQFLPGFEGPLPFVLETGYVGVGESEDVQAFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVFEIGPLAFIKEDYNGSLPNLVLRSHSWTKVSSIIFVDLPVSTGFSYATTESAAQRSDWRLVHQVHQFLRKWLIDHPKFLSNEVYIGGDSYSGIPIPVIVQEISQGNENGVKPWINLQGYLLGNAATTGREKNYEIPFSHGMGLICDELYESLQKNCKGEYVSVDTKNLLCSRDIQSYNEATSGINTAHILDPLCEWLDTKVSWRRSLTQKYPWKYLNSHLKLPPLNCRSYAYFLCGYWANDDNVRNALHIRKGSTGKWHRCTYDIPNKKEIFSSYEYHVNLSRKGYRSLIYSGDHDMTIPFLATQAWVRSLNYSIVDDWRQWYTNGQVAGYTRTYSNRMTFATVKGGGHTAPEYKPEECFAMYSRWISNSAL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3011g00003 484 Pfam Serine carboxypeptidase 54 481 IPR001563 GO:0004185|GO:0006508
Gabi3011g00003 484 SUPERFAMILY alpha/beta-Hydrolases 50 481 IPR029058 -
Gabi3011g00003 484 FunFam Serine carboxypeptidase-like 11 44 484 - -
Gabi3011g00003 484 FunFam Carboxypeptidase 338 483 - -
Gabi3011g00003 484 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 468 IPR001563 GO:0004185|GO:0006508
Gabi3011g00003 484 Gene3D alpha/beta hydrolase 46 316 IPR029058 -
Gabi3011g00003 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Gabi3011g00003 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 148 158 IPR001563 GO:0004185|GO:0006508
Gabi3011g00003 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 451 464 IPR001563 GO:0004185|GO:0006508
Gabi3011g00003 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 147 IPR001563 GO:0004185|GO:0006508
Gabi3011g00003 484 Gene3D - 339 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3011g00003 Gabi-Chr3011 43192 49076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3011g00003 44 73 Calmodulin-binding Proteins AT2G22960 70.000 2.13e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3011g00003 K16296 - gmx:100792006 832.402