Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi300g00011 ATGACTCAGGCCGTGGAGGTGCTCAATCGGTATGGGACGGATCTGGTGGGGGAAGCGAGGGGTTCTGATTCGGAGTGTTTGGTGGGTTTTGAGTGCTTCTTGAACATTGTGAGGGCACTGGGAATGGGATCGTGCATCTCAGAGGTTGGTGCTGGTGGTGGTCCCCCTCCTCTTCTCCCTTATGCAGCTGAATCCAATTTGGATGGTGGGAAGAAGAGGAGGTTGAGGGGTTCCACTTCTTTTGATTATAAAGTGCCTGGGAGGATGTTCTTGAATGGGTCAAGCGAGGTTGCATCCATGTATTGCAAGCAAGGTAGAAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAATTTTTGTTCAAAGGAGGGCACTATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCATAGGGTTGCTAAGAAAGTTAGGGATTCTTTCCCTATAAAGCTCAATGCTCAATGGGATTTGCATCGTAAGAATAAAGATGGACTCAGTGATCATAGCAGTGCTGCTGGAAGTTATAAATCTGAAGGGACTGGATTTAGACTGGTTGATGAGAAACCTAGTCCCACTGATCATGAGCTTGATGGAACAAATACTATTTTGACACTAAGAGAATCTTTTTTGAAGGCTTGTAAGATCATGGACAAAGAACTGAAACTGCATCCTGATATTGATTGCTTTTGTAGCGGGACTACAGCTGTTACCTTGGTCAAACAGGGGCTGGACCTAGTTATTGGAAATATTGGAGATTCAAGAGCTGTATTGGGTACCCGAGATCATGATGATTCTCTTATTGCTGTTCAGTTAACCATTGACCTTAAGCCAAATCTTCCAAGGGAAGAAGAAAGGATCAAGCTTCGTAGAGGAAGGGTTTTTTCCCTTCAGAATGAACCTGAGGTGGCTCGAGTTTGGCTGCCTAACTCTGATTTCCCTGGTCTTGCTATGGCACGGGCTTTTGGAGATTTTTGTTTGAAGGACTTCGGATTGATCGCTGTTCCGGATATCTCCTATCACCGCCTTACTGAGAAAGATGAATTTGTTGTATTAGCAACAGATGGGATTTGGGACGTTTTAACAAACGAAGAAGTTGTGGACATTGTAGCTTCAGCTTCACGCTCTACCGCGGCTCGAGCACTAGTTGAGTCAGCTGTTCGAGCATGGAGGACAAAATTCCCTTTTTGTAAGGTTGATGATTGTGCTGTAGTTTGCCTCTTCTTTGATTCAAATTCAGACTTCAAGTCAGCATATATCATGGACAAGCTGGTACCACAGGCATCAATTGACCAATCTGAGCAGTCACCTCTACTTGGTGAGAATGGAATTGGAGTGGAAGCTGAAAAACAGCAGTAA 1365 0.4454 MTQAVEVLNRYGTDLVGEARGSDSECLVGFECFLNIVRALGMGSCISEVGAGGGPPPLLPYAAESNLDGGKKRRLRGSTSFDYKVPGRMFLNGSSEVASMYCKQGRKGINQDAMLVWENFCSKEGTIFCGVFDGHGPYGHRVAKKVRDSFPIKLNAQWDLHRKNKDGLSDHSSAAGSYKSEGTGFRLVDEKPSPTDHELDGTNTILTLRESFLKACKIMDKELKLHPDIDCFCSGTTAVTLVKQGLDLVIGNIGDSRAVLGTRDHDDSLIAVQLTIDLKPNLPREEERIKLRRGRVFSLQNEPEVARVWLPNSDFPGLAMARAFGDFCLKDFGLIAVPDISYHRLTEKDEFVVLATDGIWDVLTNEEVVDIVASASRSTAARALVESAVRAWRTKFPFCKVDDCAVVCLFFDSNSDFKSAYIMDKLVPQASIDQSEQSPLLGENGIGVEAEKQQ 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi300g00011 454 Pfam Protein phosphatase 2C 203 390 IPR001932 -
Gabi300g00011 454 Gene3D - 92 420 IPR036457 -
Gabi300g00011 454 ProSiteProfiles PPM-type phosphatase domain profile. 97 411 IPR001932 -
Gabi300g00011 454 FunFam probable protein phosphatase 2C 33 92 414 - -
Gabi300g00011 454 SUPERFAMILY PP2C-like 92 413 IPR036457 -
Gabi300g00011 454 PANTHER PROTEIN PHOSPHATASE 95 409 IPR015655 GO:0004722|GO:0006470
Gabi300g00011 454 SMART PP2C_4 91 409 IPR001932 -
Gabi300g00011 454 MobiDBLite consensus disorder prediction 165 200 - -
Gabi300g00011 454 CDD PP2Cc 97 411 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi300g00011 Gabi-Chr300 101350 107834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi300g00011 69 415 PP2C-type Phosphatase Gene Family AT1G16220 59.497 3.20e-149 432