Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3002g00001 ATGTTCAAATATATTCCCCAAGGTGATGCTATCTTCATGAAGTGGGTGCTAACAACATGGACAGATGAGGAATGCAAGCAAATAATGCAGAACTGTTACAAGGCACTACCTCAGGGAGGCAAACTAATTGCTTGTGAGCCAGTGTTGCCAGAGCATTCTGATGACAGTCACAGAACAAGGGCATTGCTTGAAGGTGACATATTTGTGATGACAATCTACAGAGCCAAGGGAAAGCACAGAACTGAAGAACAGTTCAAGAAACTAGGCATTTCTTCAGGTTTCCCTCGTTTCAGAGCCTTTCATGTCGACCATTTCTACACTGTGCTTGAGTTTCAGAAATGA 342 0.4298 MFKYIPQGDAIFMKWVLTTWTDEECKQIMQNCYKALPQGGKLIACEPVLPEHSDDSHRTRALLEGDIFVMTIYRAKGKHRTEEQFKKLGISSGFPRFRAFHVDHFYTVLEFQK 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3002g00001 113 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 113 IPR016461 GO:0008168
Gabi3002g00001 113 PANTHER O-METHYLTRANSFERASE 1 100 IPR016461 GO:0008168
Gabi3002g00001 113 Pfam O-methyltransferase domain 1 94 IPR001077 GO:0008171
Gabi3002g00001 113 Gene3D Vaccinia Virus protein VP39 2 99 IPR029063 -
Gabi3002g00001 113 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 111 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3002g00001 Gabi-Chr3002 4757 7349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3002g00001 1 113 Monolignol Biosynthesis Gene Families AT3G53140 78.761 2.03e-67 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3002g00001 - - gmx:100784957 222.246