Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2g00019 ATGAAGTTAGAAATGGAGGTAATCTCCAAAGAAATCATCAAACCCTCTTCTCCAACCCCTGACCATTTACGTCACTACCAACTCTCTTTTCTCGATCAAATCTCTCCCGTGGTGTATAACCCATTAGTTCTCTTTTACTCTTCCGATGGTACCACTGAATTCAACAGAACCACCATATCTAACCATTTGAAGAAATCTTTGTCAGATGTCTTAACCTATTTCTACCCTCTTGCTGGGCGAATCAATGGCAAGAACTTCATAGACTGCAACGACGATGGCATCCCTTACTTACAAGCAAAAGTGAAGTGTAAACTAGTCGATGTTATTCATAAGCCAGTTCCAGGAGAACTCAACCATTTGGTTCCATTTCAACTAGATGATATCACCGATATCCTATTTGGTGTTCAACTCAATGTTTTTGATTGTGGTGGTGTTGCAATCGGTGTTTGCCTTTCTCACCAGATTGCTGATGGTTTATCATTTTTCAAGTTCCTCAATAGTTGGGCAGCCATTGCTAACGGATCACAAGATGTGTTACCAAATCCACAATTTGTTTCAGCTAAGCTCTTCCCACCCAAAAATATATCTGGGTTTGATCCTCGAAGTGGCATCATAAAGGACAACATCATATGCAAGATGTTTGTGTTTGATGCTTCAGTTGTTGAAAATCTAAGGGCAAGATATGCAGATAAAACAAGCTTCGAAAACGAGAAGCTCCCAACTCGAGTGGAGGCATTATCTGCTTTCATTTGGAGTCGTTATGTGGCTGTGACCAGAGACCAATCAGGTTCACAGAGAACACATGCTGTTATTCACGCAGTGAACCTTCGTCCAAAGATGGAACCACCACTTCCTCCAGAGTCCTTTGGAAACTACTACCGAATCAGCATGACAATTCCATTGTTGAACACTGAAGAGGAGTGTCACGGGCTAGTGAAACAGGTAAGGGATCAAATAAAGAAGATTGACAAGGATTATGTGAGGAAACTACAAGAGGGAAACGAGCATTTGGATTTCCTTAAGAATAATTCATATAGAGTGCTTGTGAAGGGGGAGTTAGTGTCGTTTAGTTTCACTAGTTTGTGTAGGTTTCCTCTGTATGACTCTGATTTTGGTTGGGGAAAACCAACATGGGTTGGTTCACCTGCTTTAACTTTTAAAAATCTGGTTGTGTTCATCGACACCAAGACGGGTGATGGCATAGAAGCCTATGTTAGCTTGAAGGTGGAGGACATGGCAAAGTTCGAAGCAGATGAGGAGTTGCTTGCTTGTGTTAATAAAGACTGA 1287 0.4141 MKLEMEVISKEIIKPSSPTPDHLRHYQLSFLDQISPVVYNPLVLFYSSDGTTEFNRTTISNHLKKSLSDVLTYFYPLAGRINGKNFIDCNDDGIPYLQAKVKCKLVDVIHKPVPGELNHLVPFQLDDITDILFGVQLNVFDCGGVAIGVCLSHQIADGLSFFKFLNSWAAIANGSQDVLPNPQFVSAKLFPPKNISGFDPRSGIIKDNIICKMFVFDASVVENLRARYADKTSFENEKLPTRVEALSAFIWSRYVAVTRDQSGSQRTHAVIHAVNLRPKMEPPLPPESFGNYYRISMTIPLLNTEEECHGLVKQVRDQIKKIDKDYVRKLQEGNEHLDFLKNNSYRVLVKGELVSFSFTSLCRFPLYDSDFGWGKPTWVGSPALTFKNLVVFIDTKTGDGIEAYVSLKVEDMAKFEADEELLACVNKD 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2g00019 428 Pfam Transferase family 4 421 - -
Gabi2g00019 428 Gene3D - 1 197 IPR023213 -
Gabi2g00019 428 PANTHER F21J9.9 6 424 - -
Gabi2g00019 428 Gene3D - 206 424 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2g00019 Gabi-Chr2 123969 125255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2g00019 3 416 Monolignol Biosynthesis Gene Families AT5G48930 26.457 3.21e-38 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2g00019 K13065 - gmx:102670206 709.138