Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2g00018 ATGAAGTTAGAAATGGAGGTAATCTCCAAAGAAATCATCAAACCCTCTTCTCCAACCCCTCACCATCTTCGTCAATACCAACTCTCTTTTCTCGACCAAGTCGCTCCCTTGGTGTATAGCCCATTAGTTCTCTTTTACTCTTCCGACGGTACCACTGAATTCAAAAGAACCACCATATCCAACCATTTGAAGAAATCTTTGTCAGATGTCTTAACCCATTACTACCCTTTTGCTGGGAGAATCAATGACAAGAATTTCATAGAATGCAACGACGAGGGCATCCCTTACTTCCAAGCAAAAGTGAAGTGTAAACTTGTCGATGTTATTCATAAGCCAGTTCCAGGAGAACTCAAACATTTGGTTCCATTTGAACTAGATGATATCACCGATATCCTATTTGGTGTTCAACTTAATGTTTTTGAATGTGGTGGTATAGCAATCGGTGTTTGCCTTTCTCACCAGATTGCAGACGCTTTATCATTTTTCACGTTCATCAATAGTTGGGCAGCCATTGCTAATGGATCACAAGATGTGTTGCCAAATCCACAATTTGTTTCAGCTAAGCTCTTCCCACCCAAAAATACAACTGGGTTTGATCCTCGAAGTGGTATCATAAAGGACAACATCATATGCAAGATGTTTGTGTTTGATGCTTCCGTTGTTGAAAATTTAAGGGCAAGATATGCTGATACAACAAGCTTTGAAAACGAGAAGCACTTAACTCGAGTGGAGGCATTATCTGCATTCATTTGGAGTCGTTATGTGGCTGTGACTAGACACCAATCAGGTCCACAGAGAACACATGTTGTGGTTCACGCTGTGAACCTTCGTCCAAAGATGGAACCACCACTTCCTCCAGAGTCCTTTGGAAACTACTCTAGAATTTCTATGACTTTTCCATCGTTGAATACTGAAGAGGAGTGTCACGGGCTAGTGAAAGAGGTAAGGGATCAGATGAAGAAGATGGACAAGGATTATGTGAGAAAACTTCAAGAGGGAAATGAGCATTTGGATCTCCTTAAGGATAGTTTTGATAGAGTGCTTGTGAAGGGTGAGTTAGTAGCGTTTAATTTCACCAGTTTGTGTAGGTTTCCTTTGTATGATGCTGATTTCGGTTGGGGAAAACCAACGTGGGTAAGTGTACCTGTTTTAATGTTTAAAAATCTGGTTATGTTCGTTGACACCAAGACGGGTGGTGGCATAGAAACCTACGTTAGTTTGAAAGTGGAGGACATGGTAAAGTTCGAAGCAGACGAGGAGTTGCTTGCCTGTGTGAATAAGAAGCCTACTTATTCGTTCTTCATGAGTAAGTTGTAA 1317 0.4108 MKLEMEVISKEIIKPSSPTPHHLRQYQLSFLDQVAPLVYSPLVLFYSSDGTTEFKRTTISNHLKKSLSDVLTHYYPFAGRINDKNFIECNDEGIPYFQAKVKCKLVDVIHKPVPGELKHLVPFELDDITDILFGVQLNVFECGGIAIGVCLSHQIADALSFFTFINSWAAIANGSQDVLPNPQFVSAKLFPPKNTTGFDPRSGIIKDNIICKMFVFDASVVENLRARYADTTSFENEKHLTRVEALSAFIWSRYVAVTRHQSGPQRTHVVVHAVNLRPKMEPPLPPESFGNYSRISMTFPSLNTEEECHGLVKEVRDQMKKMDKDYVRKLQEGNEHLDLLKDSFDRVLVKGELVAFNFTSLCRFPLYDADFGWGKPTWVSVPVLMFKNLVMFVDTKTGGGIETYVSLKVEDMVKFEADEELLACVNKKPTYSFFMSKL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2g00018 438 Coils Coil 312 332 - -
Gabi2g00018 438 Gene3D - 1 198 IPR023213 -
Gabi2g00018 438 Gene3D - 206 425 IPR023213 -
Gabi2g00018 438 Pfam Transferase family 4 421 - -
Gabi2g00018 438 PANTHER F21J9.9 6 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2g00018 Gabi-Chr2 118216 119532 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2g00018 3 416 Monolignol Biosynthesis Gene Families AT5G48930 26.457 4.39e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2g00018 K13065 - gmx:102670206 671.389