Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2g00017 ATGAAGTTAGAAGTTGACATAATCTCCAAAGAAATCATCAAACCCTCTTCTCCAACCCCTCACCATCTTCGTCATTACCAACTCTCCTTTCTCGATCAAATCTCTCCATCAGTGTATGAACCCACCGTTCTCTTTTATACTTGCGATGGTTCCACTGAATTCAACATAACCTCCATGTCCAACCATTTGAAGAAATCTCTGTCAGATGTCTTAACCCATTACTACCCTTTTGCTGGGAGAATCAATGGCAAGAATTTCATAGACTGCAACGACGAGGGCATCCCTTACTTCCAAGCAAAAGTGAAGTGCAAACTTGTCGATGTTATTCATAAACCAGTTCCAGGAGAACTCAACCATTTGGTTCCATTTCAACTAGATGATATCACCGATATCCTATTTAGTGTTCAACTCAATGTTTTTGAATGTGGTGGTATTGCAATCGGTGTTTGCCTTTCTCACCAGATTGCTGATGGTTTATCATTTTTCACGTTCATAAATAATTGGGCAGCCATTGCTAATGGATCACAAGATGTGTTGCCAAATCCACAATTTGTTTCAGCTAAGCTCTTTCCACCCAAAAATATATCTGGGTTTGATCCTCGAAGTGGTATCATAAAGGACAACATCATATGCAAGATGTTTGTGTTTGATGCTTCCGTTGTTGAAAATTTAAGGGAAAGATATGCTGACACAAGCAGCTTCGAAAACGAGAAGCCCCCAACTCGAGTGGAGGCTTTATCTGCTTTCATTTGGAGTCGTTATGTGGCTGTGACTAGAGACCAATCAAGTCCACAGAGAACACATGCTGTGGTTCACGCTGTGAACCTTCGTCCAAAGATGGAACCACCTCTTCCTCCAGAGTCCTTTGGAAACTACTACAGAATTAGCATGACAATTCCATCGTTGAACACTGAAGAGGAGTGTCACGGGCTAGTGAAACGGGTAAGGGATCAGATAAAGAAGATTGACAAGGATTATGTGAGGAAACTACAAGAGGGAAACGAGCATTTGGGTTTCCTTAAGGATAGTTTAGATAGAGTGCTTGTGAAGGGGGAGTTAGTGGCGTTTAATTTCACCAGTTTGTGTAGGTTTCCTTTGTATGATGCTGACTTTGGTTGGGGGAAACCAACATGGGTCGGTGTACCTTCTTTAATGTTTAAAAATCTGGTTGTGTTCGTTGACACCAAGACCGATGGTGGCATAGAAGCCTACGTTAGCTTGAAGGTGGAGGATATGGTCAAGTTCGAAGAAGACGAGGAGTTGCTTGCTTGTGTGAACAAAGCTCGGAGTTCTTGA 1296 0.4213 MKLEVDIISKEIIKPSSPTPHHLRHYQLSFLDQISPSVYEPTVLFYTCDGSTEFNITSMSNHLKKSLSDVLTHYYPFAGRINGKNFIDCNDEGIPYFQAKVKCKLVDVIHKPVPGELNHLVPFQLDDITDILFSVQLNVFECGGIAIGVCLSHQIADGLSFFTFINNWAAIANGSQDVLPNPQFVSAKLFPPKNISGFDPRSGIIKDNIICKMFVFDASVVENLRERYADTSSFENEKPPTRVEALSAFIWSRYVAVTRDQSSPQRTHAVVHAVNLRPKMEPPLPPESFGNYYRISMTIPSLNTEEECHGLVKRVRDQIKKIDKDYVRKLQEGNEHLGFLKDSLDRVLVKGELVAFNFTSLCRFPLYDADFGWGKPTWVGVPSLMFKNLVVFVDTKTDGGIEAYVSLKVEDMVKFEEDEELLACVNKARSS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2g00017 431 Gene3D - 206 426 IPR023213 -
Gabi2g00017 431 Gene3D - 1 197 IPR023213 -
Gabi2g00017 431 PANTHER F21J9.9 6 425 - -
Gabi2g00017 431 Pfam Transferase family 4 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2g00017 Gabi-Chr2 106154 107449 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2g00017 3 417 Monolignol Biosynthesis Gene Families AT5G48930 26.174 2.49e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2g00017 K13065 - gmx:102670206 685.641