Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2g00016 ATGAAGTTAGAAGTTGAGATAATCTCCAAAGAAATCATCAAACCCTCTTCTCCAACCCCTCACCATCTTCGTCATTACCAACTCTCCTTTCTAGATCAAATCTCTCCATCAGTGTATGAACCCACCGTTCTCTTTTATACTTGCTCCACTGAATTCAACATAACCACCATGTCCAACCATTTGAAGAAATCTCTGTCAGATGTCTTAACCCATTACTACCCTTTTGCTGGGAGAATCAATGGCAAGAATTTCATAGATTGCAATGACGAGGGCATCCCTTACTTCCAAGCAAAAGTGAAGTGTAAACTTGTCGATGTTATTCATAAACCAGTTCCAGGAGAACTCAACCATTTGGTTCCATTTCAACTAGATGATATCACCGATATCCTATTTAGTGTTCAATTCAATGTTTTTGAATGTGGTGGTATTGCAATCGGTGTTTGCCTTTCTCACCAGATTGCTGATGGTTTATCATTTTTCACCTTCATAAATAATTGGGCAGCCATTGCTAATGGATCACAAGATGTGTTGCCAAATCCACAATTTGTTTCAGCTAAGCTCTTCCCACCCAAAAATACAACTGGATTTGATCCTCGAAGTGGTATCATAAAGGACAACATCATATGCAAGATGTTTGTGTTTGATGCTTCCGTTGTTGAAAATTTAAGGGGAAGATATGGTGATACAACAAGCTTCGAAAACGAGAAGCCCCCAACTCGAGTGGAGGCATTATCTGCTTTCATTTGGAGTCGTTATGTGGCTGTGACTAGAGACCAATCAAGTCCACAGAGAACACATGCTGTGGTTCACGCTGTGAACCTTCGTCCAAAGATGGAACCACCATTGCCTCCAGAGTCCTTTGGAAACTACTCTCGATTTACTTTGACAATTCCAACGTTGAACACTGAAGAGGAGTGTCACGGGCTAGTGAAAGAGGTAAGGGATCAGATAAAGAAGTTTGACAAGGATTATGTTAGAAAACTTCAAGAGGGAAACGAGCATTTGGATTTCCTTAAGGATAATTCATATAGAGTGCTTGTGAAGGGGGACTTAGTGGCGTTTAATTTCACCAGTTTGTGTAGGTTTCCTTTGTATGACGCTGATTTTGGTTGGGGGAAACCAACATGGGTCGGTGTACCTTCTTTAAAGTTTAAAAATCTGGTTGTGTTCGTCGACACCAAGACCGGTGGTGGCATAGAGACTTACGTTAGCTTGAAGGTGGAGGATATGGTCAAATTCGAAGAAGACGAGGAGTTTCTTGCTTGTGTGAACACATCTCGGAGTTGTTGA 1290 0.4124 MKLEVEIISKEIIKPSSPTPHHLRHYQLSFLDQISPSVYEPTVLFYTCSTEFNITTMSNHLKKSLSDVLTHYYPFAGRINGKNFIDCNDEGIPYFQAKVKCKLVDVIHKPVPGELNHLVPFQLDDITDILFSVQFNVFECGGIAIGVCLSHQIADGLSFFTFINNWAAIANGSQDVLPNPQFVSAKLFPPKNTTGFDPRSGIIKDNIICKMFVFDASVVENLRGRYGDTTSFENEKPPTRVEALSAFIWSRYVAVTRDQSSPQRTHAVVHAVNLRPKMEPPLPPESFGNYSRFTLTIPTLNTEEECHGLVKEVRDQIKKFDKDYVRKLQEGNEHLDFLKDNSYRVLVKGDLVAFNFTSLCRFPLYDADFGWGKPTWVGVPSLKFKNLVVFVDTKTGGGIETYVSLKVEDMVKFEEDEEFLACVNTSRSC 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2g00016 429 PANTHER F21J9.9 6 423 - -
Gabi2g00016 429 Gene3D - 1 196 IPR023213 -
Gabi2g00016 429 Pfam Transferase family 4 419 - -
Gabi2g00016 429 Gene3D - 204 423 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2g00016 Gabi-Chr2 91853 93189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2g00016 3 415 Monolignol Biosynthesis Gene Families AT5G48930 26.339 5.75e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2g00016 K13065 - gmx:102670206 669.077