Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2g00015 ATGAAGGTTGAAGTTGAATTAATCTCCAAACAAGTCATAAAACCCTCTTCTCCCACACCCAATCATCTTCGCCATTACAAGCTCTCCTTGCTCGACCAGCTCACTCCTCAACTCAACAACTCCATGGTTTACTTCTACGCTCATGAATCCATGAGCATCACCGACGACCCTTCGAACCACCTTAAGAAATCGCTGTCTCAAGCCTTGTCATATTACTACCCACTCGCAGGAAGACACGTGGACAACACTTTTGTAGAGTGCAACGACGAGGGTGTCCCTTACTTGGAAGCTAAAGTCAGTTATTGCAAGCTCAACGATGTGTTGGAGAATCCTATACCAAGCGAGGTTAGTAAGTTGCTTCCATTTGCAATGGATGAGATTGTTGACACACTCCTTGGTGTTCAACTCAATGTTTTTGATTGTGGTGGAATAGCCATTGGTATATGCATGTCCCACAAGATAGGTGATGCACTTTCCTTTTTTGGGTTCATTCAAAGTTGGACAACTATTGCTCGTGGAGAAGCACGTGATCATGAAGGAATCAAGACACGTTTCATATCTGCAACCTTATTTCCCCCAAGGGATATGTCGTGGTATGATCCAAACAAAATCATCCCAAAAGATGAGAACATCGTGTCTAAGAGATTTGTGTTTGATGCAACTGTCATAGATGCTCTCAAAGCAAAATATGAAGACATGATGGCTTTGCAAAAAACCCCTTCAAGAGTTGAGGTTCTATCAACTTTCATATGGACTCGCTTTATGGCCACTACTCAGGTCGCTTCTAAGGGGCACAGATCCTATGTTGTGGCTCACACAGTGAACCTGCGTTCGAGAATGGACCCACCATTACCAGCTTACGCGTTTGGAAATTACTATCGAGCTGCTACAATGTTTCCATTGTTGGATTATAAGGGGGAGTGTTGCGATCTGGTGAGGAACCTTAGAGTGGAAATAAAGAAAATAGACAATGATTATATACTCAAACTTCAAGAGGGTATTGAATACTTGAACTCTCTTAGAGAAGATTTTAAAAGATTGGCGAAGAATGAGGAGAAGGAGATTGTGCCGTTTACCTTCACTGCTTTGTGCAGGTTTCCTGTTTATGATGCTGATTTTGGTTGGGGGAAGCCAACCTGGGTAGGGCCACCCGCATGGAAAGTGAAAAATGTTGCTATTTTTATAGATACCAAGTTAGGTGGTGGCATTGAAGCATATATAAGCATGACAGAGGAGGATATGGTTGAATTTCAAAATGACAAGGAATTGCTCGCACATATTTCAAAATGA 1290 0.4233 MKVEVELISKQVIKPSSPTPNHLRHYKLSLLDQLTPQLNNSMVYFYAHESMSITDDPSNHLKKSLSQALSYYYPLAGRHVDNTFVECNDEGVPYLEAKVSYCKLNDVLENPIPSEVSKLLPFAMDEIVDTLLGVQLNVFDCGGIAIGICMSHKIGDALSFFGFIQSWTTIARGEARDHEGIKTRFISATLFPPRDMSWYDPNKIIPKDENIVSKRFVFDATVIDALKAKYEDMMALQKTPSRVEVLSTFIWTRFMATTQVASKGHRSYVVAHTVNLRSRMDPPLPAYAFGNYYRAATMFPLLDYKGECCDLVRNLRVEIKKIDNDYILKLQEGIEYLNSLREDFKRLAKNEEKEIVPFTFTALCRFPVYDADFGWGKPTWVGPPAWKVKNVAIFIDTKLGGGIEAYISMTEEDMVEFQNDKELLAHISK 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2g00015 429 PANTHER F21J9.9 6 425 - -
Gabi2g00015 429 Gene3D - 208 427 IPR023213 -
Gabi2g00015 429 Pfam Transferase family 4 423 - -
Gabi2g00015 429 Gene3D - 1 199 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2g00015 Gabi-Chr2 86801 88090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2g00015 3 418 Monolignol Biosynthesis Gene Families AT5G48930 25.828 3.11e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2g00015 K13065 - gmx:100801695 628.632