Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2998g00041 ATGGCTTCTGCTATTGTTCGTAGAACCATCACCCATAGCTTCAAGATCCCCTTTTCTTCTTCTTGGTGCTTCCACAATCACTTACTGGCTCACCATTCCTCAATCCACAAGGCCGTGGATGAACAACATGATGTTGTTTCCTTTCATAGCCAAGCTTATGGTGGTGGTGGTGGTGGAGGAGGAGGAGGATTGCCATCTTATATGCGTGGAGCTGTGTACTGGGAACCCAACAAGCCTCTCACCATTGAGGAATTCCACATGCCTCGCCCCAAGGCTGCCTGTGGAGTATGCCACTCTGATCTACATGTTTTGAAAGGTGAAATTCCTTTTTCCAGTCCTTGTGTTGTGGGGCATGAGATTACTGGTGAAGTTGTTGAACATGGACCACACTATGACGGCAAAATCATTGAAAGGCTTCCAGTTGGATCTCGAGTTGTTGGGGCCTTCATTATGCCTTGTGGCAACTGCTCCTACTGTTCCAAGGGCCATGATGATCTATGTGAAGCTTTCTTTGCTTATAACCGGGCAAAAGGAACCCTCTATGATGGTGAAACTCGTCTTTTTCTTCGAAGCAATGGAAAACCAATATTCATGTATAGTATGGGAGGGCTTGCAGAATACTGTGTTGTGCCAGCAAATGCATTGGCTGTGTTACCAGACTCATTGCCATATTCCGAGTCTGCAATTCTAGGATGTGCTGTTTTTACTGCTTATGGTGCTATGGCTCATGCGGCTGAAGTGCGTCCTGGTGATTCTGTTGCTGTTATTGGAACTGGGGGTGTAGGATCTAGTTGTTTGCAGATAGCTAGAGCATTTGGTGCCTCAGATATAATTGCCGTGGATGTTCAGGATGAAAAACTACTGAAAGCAAAGACATTTGGTGCTACTCACACTATAAATTCAGCAAAGGAAGATCCCATTGAAAAGATAATTGAAATTACTGGTGGAAAGGGTGTTGACGTTGCTGTGGAAGCCTTGGGGAAACCACAGACATTTGCTCAGTGCACACAAAGTGTGAAGGATGGAGGAAAAGCCGTGATGATTGGACTGGCACAAGCTGGTTCTTTAGGAGAAGTGGATATAAATCGTCTTGTTCGTAGAAAGATACAAGTTATTGGCTCATACGGAGGCAGGGCGAGGCAAGATCTTCCAAAGTTAATTAGATTGGCAGAAACAGGTATCTTCAATCTTGGACATGCTGTTTCTAGAACATACACCTTTGAGGAGGCAGGCAAAGCATTCCAAGATCTCAATGAAGGAAAAATTGTTGGTCGAGCTGTTATTGAGATAATTTAG 1296 0.4468 MASAIVRRTITHSFKIPFSSSWCFHNHLLAHHSSIHKAVDEQHDVVSFHSQAYGGGGGGGGGGLPSYMRGAVYWEPNKPLTIEEFHMPRPKAACGVCHSDLHVLKGEIPFSSPCVVGHEITGEVVEHGPHYDGKIIERLPVGSRVVGAFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRSNGKPIFMYSMGGLAEYCVVPANALAVLPDSLPYSESAILGCAVFTAYGAMAHAAEVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDEKLLKAKTFGATHTINSAKEDPIEKIIEITGGKGVDVAVEALGKPQTFAQCTQSVKDGGKAVMIGLAQAGSLGEVDINRLVRRKIQVIGSYGGRARQDLPKLIRLAETGIFNLGHAVSRTYTFEEAGKAFQDLNEGKIVGRAVIEII 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2998g00041 431 Gene3D - 237 374 - -
Gabi2998g00041 431 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 67 428 - -
Gabi2998g00041 431 CDD Zn_ADH10 68 429 - -
Gabi2998g00041 431 Pfam Alcohol dehydrogenase GroES-like domain 93 215 IPR013154 -
Gabi2998g00041 431 SMART PKS_ER_names_mod 70 428 IPR020843 GO:0016491
Gabi2998g00041 431 FunFam Sorbitol dehydrogenase 237 375 - -
Gabi2998g00041 431 Pfam Zinc-binding dehydrogenase 260 391 IPR013149 -
Gabi2998g00041 431 FunFam Alcohol dehydrogenase (Zinc) 72 249 - -
Gabi2998g00041 431 Gene3D - 72 420 - -
Gabi2998g00041 431 SUPERFAMILY GroES-like 64 263 IPR011032 -
Gabi2998g00041 431 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 222 395 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2998g00041 Gabi-Chr2998 370139 374118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2998g00041 94 430 Monolignol Biosynthesis Gene Families AT4G37990 24.927 7.65e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2998g00041 - - gmx:100802431 714.531