Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2998g00040 ATGGCTTCTGCTATTGTTCGTAGAACCATCACCCATAGCTTCAAGATCCCCTTTTCTTCTTCTTGGTGCTTCCACAATCACTTACTGGCTCACCATTCCTCAATCCACAAGGCCGTGGATGAACAACATGATGTTGTTTCCTTTCATAGCCAAGCTTATGGTGGTGGTGGTGGTGGAGGAGGAGGAGGATTGCCATCTTATATGCGTGGAGCTGTGTACTGGGAACCCAACAAGCCTCTCACCATTGAGGAATTCCACATGCCTCGCCCCAAGGCTGGTGAAGTTCTCATCAAAACCAAGGCCTGTGGAGTATGCCACTCTGATCTACATGTTTTGAAAGGTGAAATTCCTTTTTCCAGTCCTTGTGTTGTGGGGCATGAGATTACTGGTGAAGTTGTTGAACATGGACCACACTATGACGGCAAAATCATTGAAAGGCTTCCAGTTGGATCTCGAGTTGTTGGGGCCTTCATTATGCCTTGTGGCAACTGCTCCTACTGTTCCAAGGGCCATGATGATCTATGTGAAGCTTTCTTTGCTTATAACCGGGCAAAAGGAACCCTCTATGATGGTGAAACTCGTCTTTTTCTTCGAAGCAATGGAAAACCAATATTCATGTATAGTATGGGAGGGCTTGCAGAATACTGTGTTGTGCCAGCAAATGCATTGGCTGTGTTACCAGACTCATTGCCATATTCCGAGTCTGCAATTCTAGGATGTGCTGTTTTTACTGCTTATGGTGCTATGGCTCATGCGGCTGAAGTGCGTCCTGGTGATTCTGTTGCTGTTATTGGAACTGGGGGTGTAGGATCTAGTTGTTTGCAGATAGCTAGAGCATTTGGTGCCTCAGATATAATTGCCGTGGATGTTCAGGATGAAAAACTACTGAAAGCAAAGACATTTGGTGCTACTCACACTATAAATTCAGCAAAGGAAGATCCCATTGAAAAGATAATTGAAATTACTGGTGGAAAGGGTGTTGACGTTGCTGTGGAAGCCTTGGGGAAACCACAGACATTTGCTCAGTGCACACAAAGTGTGAAGGATGGAGGAAAAGCCGTGATGATTGGACTGGCACAAGCTGGTTCTTTAGGAGAAGTGGATATAAATCGTCTTGTTCGTAGAAAGATACAAGTTATTGGCTCATACGGAGGCAGGGCGAGGCAAGATCTTCCAAAGTTAATTAGATTGGCAGAAACAGGTATCTTCAATCTTGGACATGCTGTTTCTAGAACATACACCTTTGAGGAGGCAGGCAAAGCATTCCAAGATCTCAATGAAGGAAAAATTGTTGGTCGAGCTGTTATTGAGATAATTTAG 1320 0.4462 MASAIVRRTITHSFKIPFSSSWCFHNHLLAHHSSIHKAVDEQHDVVSFHSQAYGGGGGGGGGGLPSYMRGAVYWEPNKPLTIEEFHMPRPKAGEVLIKTKACGVCHSDLHVLKGEIPFSSPCVVGHEITGEVVEHGPHYDGKIIERLPVGSRVVGAFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFLRSNGKPIFMYSMGGLAEYCVVPANALAVLPDSLPYSESAILGCAVFTAYGAMAHAAEVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDEKLLKAKTFGATHTINSAKEDPIEKIIEITGGKGVDVAVEALGKPQTFAQCTQSVKDGGKAVMIGLAQAGSLGEVDINRLVRRKIQVIGSYGGRARQDLPKLIRLAETGIFNLGHAVSRTYTFEEAGKAFQDLNEGKIVGRAVIEII 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2998g00040 439 Gene3D - 72 428 - -
Gabi2998g00040 439 Pfam Zinc-binding dehydrogenase 268 399 IPR013149 -
Gabi2998g00040 439 Pfam Alcohol dehydrogenase GroES-like domain 93 223 IPR013154 -
Gabi2998g00040 439 Gene3D - 245 382 - -
Gabi2998g00040 439 SMART PKS_ER_names_mod 75 436 IPR020843 GO:0016491
Gabi2998g00040 439 FunFam Alcohol dehydrogenase (Zinc) 72 257 - -
Gabi2998g00040 439 FunFam Sorbitol dehydrogenase 245 383 - -
Gabi2998g00040 439 SUPERFAMILY GroES-like 64 271 IPR011032 -
Gabi2998g00040 439 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 67 436 - -
Gabi2998g00040 439 CDD Zn_ADH10 68 437 - -
Gabi2998g00040 439 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 230 403 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2998g00040 Gabi-Chr2998 370139 374118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2998g00040 82 438 Monolignol Biosynthesis Gene Families AT4G37990 25.069 7.51e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2998g00040 - - gmx:100802431 736.487