Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2996g00004 ATGAACCCTCACACCAAAATTGTACAAAAATGGAACAAGTCTTTGGCCATTTTTTGCTTGACTGCTATTTTTGTGGATCCATTATTTTTCTTCTTGCTCTATGTGCAGCAGGATTATAATTGTATTGTTATCAACTGGACTATGACAACAGCACTTGTTTTACTTAGAAGCATGAATGATTTGGTATATTTCTTTAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTTGACCATCCTAAGCAAATTGCTCTTCATTACATGAAGGGTTCTTTTCTTGTTGATTTGTTTGTTGTATTTCCTCTTCCTCAGATAATGATATTGTTTGTGATACCAAATTCCTTGGGGGGAGCAAATTATGCAAAGAATCTTCTCCGTGCAGCAATCTTAGTGCAGTATATTCCAAAGTTGTACAGGTTTCTGCCACTGCTAATTGGCCAGAATCGAACAGGATTCATATTTGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTCGTTTTCATGCTTGCTAGCCATGTTGTTGGCTCTTGCTGGTACCTCTTTGGTCTACAGAGGGTTAATCAATGTTTGCGAGATGCCTGCCATAATTCTAATATTACTGGATGCATGAAATTCATTGATTGTGGACATGGCCTTAATGGAAACAATCAGTCTGACCTAACATCAGATCAGTGGAACAAGAATAAAGATGCCATTGATTGTCTGAATCCCCCTCCTGATGGTGGATTTAGTTATGGCATCTATCAGAATGCTGTGCAGCTTACTGTTGAAACTAACGTGGTTAACAAATATGTGTATTCTCTTTTTTGGGGATTCCAGCAAATCAGTACTCTAGCTGGTAATCTAGTCCCTAGCTATTTTGTGGGGGAAGTCCTTTTTACTATGGCCATCATAGGATTAGGACTCTTGCTTTTTGCGATTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGCAGGAAGCTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGGTCTAAGAAGGAGAGTAAGACAAGCTGAACGGTATACTTGGGCTGCAACAAGGGGAGTTAATGAAGAAATGCTTATGGAGAATTTGCCTGAGGATCTGCAGAGAGACATAAGACGTCATCTTTTCAAATTTGTTAAGAAAGTTCGAATTTTCGCCCTGATGGATCAGCCTATCTTAGATGCTATTTGTGAGAGACTCAAACAAAAGACATACATCAAAGGAAGTAGAATTTTGTGCCAGGGTTGTCTAGTACAGAAGATGGTATTCATTGTGCGTGGTAAATTGGAGAGTGTTGGAGAAGATGGAATTAGAGTTCCCTTAGCCGAAGGAGATGTTTGTGGTGAAGAACTTCTGACATGGTATCTTGAATATTCTTCTATAAGCACAGATGGTAGAAAAATAAGGCTCCCAGGACAGAGGTTGGTTGGCAATAGGAATGTAAGGTGCTTAACAAATGTGGAGGCATTTTCACTCTGTGCTGCAGAACTTGAAGAGGTCACAATTCTTTTCACAAGATTCTTGAGGAGTCCACGTGTTCAAGGAGCCTTAAGGTATGAATCACCTTATTGGAGATCCCTTGCAGCAACCCGGATTCAAGTTGCATGGAGATACCGGAAGAAACGTCTAAGTCGTGTTAATTCTTCAGTTTCACTATCAGATTAA 1734 0.4014 MNPHTKIVQKWNKSLAIFCLTAIFVDPLFFFLLYVQQDYNCIVINWTMTTALVLLRSMNDLVYFFNILLQFRLAYVSPESRVVGAGDLVDHPKQIALHYMKGSFLVDLFVVFPLPQIMILFVIPNSLGGANYAKNLLRAAILVQYIPKLYRFLPLLIGQNRTGFIFESAWANFIINLLVFMLASHVVGSCWYLFGLQRVNQCLRDACHNSNITGCMKFIDCGHGLNGNNQSDLTSDQWNKNKDAIDCLNPPPDGGFSYGIYQNAVQLTVETNVVNKYVYSLFWGFQQISTLAGNLVPSYFVGEVLFTMAIIGLGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEGLRRRVRQAERYTWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKVRIFALMDQPILDAICERLKQKTYIKGSRILCQGCLVQKMVFIVRGKLESVGEDGIRVPLAEGDVCGEELLTWYLEYSSISTDGRKIRLPGQRLVGNRNVRCLTNVEAFSLCAAELEEVTILFTRFLRSPRVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSVSLSD 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2996g00004 577 Gene3D Helix hairpin bin 334 399 - -
Gabi2996g00004 577 SUPERFAMILY Voltage-gated potassium channels 3 335 - -
Gabi2996g00004 577 Pfam Ion transport protein 13 334 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gabi2996g00004 577 ProSiteProfiles cAMP/cGMP binding motif profile. 407 475 IPR000595 -
Gabi2996g00004 577 Gene3D - 12 332 - -
Gabi2996g00004 577 Gene3D Jelly Rolls 405 529 IPR014710 -
Gabi2996g00004 577 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 567 - -
Gabi2996g00004 577 SUPERFAMILY cAMP-binding domain-like 335 476 IPR018490 -
Gabi2996g00004 577 CDD CAP_ED 407 523 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2996g00004 Gabi-Chr2996 8616 20069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2996g00004 1 485 Ion Channels AT3G17700 69.610 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2996g00004 K05391 - gmx:100795427 972.23