Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2996g00003 ATGGAGTCATATGAGAGAGAAACTAGTCATGTAGGACATACAGGTCCACTTCGGATTAAGAGAAAAACTCCCTTTATGCAGATGAGTGGTCCACTATATGCTACCAATGGACCTGGAAATCTTTTGCAGCAGCATATAGCTGGAACAGGAAACAAAGCAGAGGAAAGAAAGACAGAAAATTTTGCTACTTTCAGCGGCACAGGTTCAACTTACTGGAATAATAACCATGGTAGAGAAAATGAACACTTACTGAGGTCTGGACAACTGGGAATGTGTAATGATCCTTATTGTACTATTTGCCCTACTCACTTCAATGTTTCTCAGCAAAGAAATTCAAAACCTTCAACTATATGTGATCCCAAGTTCCATAATGATCTTTATGGGGATGCCAAGGGATTCGCAAGAAAGCTCTTTTCTTTCTGCTCTTCATATGTTCCTGGAGTTATGAACCCTCACACCAAAATTGTACAAAAATGGAACAAGTCTTTGGCCATTTTTTGCTTGACTGCTATTTTTGTGGATCCATTATTTTTCTTCTTGCTCTATGTGCAGCAGGATTATAATTGTATTGTTATCAACTGGACTATGACAACAGCACTTGTTTTACTTAGAAGCATGAATGATTTGGTATATTTCTTTAACATTCTTCTCCAGATAATGATATTGTTTGTGATACCAAATTCCTTGGGGGGAGCAAATTATGCAAAGAATCTTCTCCGTGCAGCAATCTTAGTGCAGTATATTCCAAAGTTGTACAGGTTTCTGCCACTGCTAATTGGCCAGAATCGAACAGGATTCATATTTGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTCGTTTTCATGCTTGCTAGCCATGTTGTTGGCTCTTGCTGGTACCTCTTTGGTCTACAGAGGGTTAATCAATGTTTGCGAGATGCCTGCCATAATTCTAATATTACTGGATGCATGAAATTCATTGATTGTGGACATGGCCTTAATGGAAACAATCAGTCTGACCTAACATCAGATCAGTGGAACAAGAATAAAGATGCCATTGATTGTCTGAATCCCCCTCCTGATGGTGGATTTAGTTATGGCATCTATCAGAATGCTGTGCAGCTTACTGTTGAAACTAACGTGGTTAACAAATATGTGTATTCTCTTTTTTGGGGATTCCAGCAAATCAGTACTCTAGCTGGTAATCTAGTCCCTAGCTATTTTGTGGGGGAAGTCCTTTTTACTATGGCCATCATAGGATTAGGACTCTTGCTTTTTGCGATTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGCAGGAAGCTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGGTCTAAGAAGGAGAGTAAGACAAGCTGAACGGTATACTTGGGCTGCAACAAGGGGAGTTAATGAAGAAATGCTTATGGAGAATTTGCCTGAGGATCTGCAGAGAGACATAAGACGTCATCTTTTCAAATTTGTTAAGAAAGTTCGAATTTTCGCCCTGATGGATCAGCCTATCTTAGATGCTATTTGTGAGAGACTCAAACAAAAGACATACATCAAAGGAAGTAGAATTTTGTGCCAGGGTTGTCTAGTACAGAAGATGGTATTCATTGTGCGTGGTAAATTGGAGAGTGTTGGAGAAGATGGAATTAGAGTTCCCTTAGCCGAAGGAGATGTTTGTGGTGAAGAACTTCTGACATGGTATCTTGAATATTCTTCTATAAGCACAGATGGTAGAAAAATAAGGCTCCCAGGACAGAGGTTGGTTGGCAATAGGAATGTAAGGTGCTTAACAAATGTGGAGGCATTTTCACTCTGTGCTGCAGAACTTGAAGAGGTCACAATTCTTTTCACAAGATTCTTGAGGAGTCCACGTGTTCAAGGAGCCTTAAGGTATGAATCACCTTATTGGAGATCCCTTGCAGCAACCCGGATTCAAGTTGCATGGAGATACCGGAAGAAACGTCTAAGTCGTGTTAATTCTTCAGTTTCACTATCAGATTAA 2040 0.401 MESYERETSHVGHTGPLRIKRKTPFMQMSGPLYATNGPGNLLQQHIAGTGNKAEERKTENFATFSGTGSTYWNNNHGRENEHLLRSGQLGMCNDPYCTICPTHFNVSQQRNSKPSTICDPKFHNDLYGDAKGFARKLFSFCSSYVPGVMNPHTKIVQKWNKSLAIFCLTAIFVDPLFFFLLYVQQDYNCIVINWTMTTALVLLRSMNDLVYFFNILLQIMILFVIPNSLGGANYAKNLLRAAILVQYIPKLYRFLPLLIGQNRTGFIFESAWANFIINLLVFMLASHVVGSCWYLFGLQRVNQCLRDACHNSNITGCMKFIDCGHGLNGNNQSDLTSDQWNKNKDAIDCLNPPPDGGFSYGIYQNAVQLTVETNVVNKYVYSLFWGFQQISTLAGNLVPSYFVGEVLFTMAIIGLGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEGLRRRVRQAERYTWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKVRIFALMDQPILDAICERLKQKTYIKGSRILCQGCLVQKMVFIVRGKLESVGEDGIRVPLAEGDVCGEELLTWYLEYSSISTDGRKIRLPGQRLVGNRNVRCLTNVEAFSLCAAELEEVTILFTRFLRSPRVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSVSLSD 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2996g00003 679 Gene3D Jelly Rolls 507 631 IPR014710 -
Gabi2996g00003 679 ProSiteProfiles cAMP/cGMP binding motif profile. 509 577 IPR000595 -
Gabi2996g00003 679 SUPERFAMILY cAMP-binding domain-like 437 578 IPR018490 -
Gabi2996g00003 679 CDD CAP_ED 509 625 IPR000595 -
Gabi2996g00003 679 Gene3D - 137 434 - -
Gabi2996g00003 679 Gene3D Helix hairpin bin 436 501 - -
Gabi2996g00003 679 MobiDBLite consensus disorder prediction 1 23 - -
Gabi2996g00003 679 Pfam Ion transport protein 162 436 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gabi2996g00003 679 SUPERFAMILY Voltage-gated potassium channels 151 437 - -
Gabi2996g00003 679 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 92 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2996g00003 Gabi-Chr2996 8616 20221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2996g00003 1 587 Ion Channels AT3G17700 57.277 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2996g00003 K05391 - gmx:100795427 1107.82