Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2996g00002 ATGGCTAATTTTGATAATGATGAGTTGCCAATACTGTCAGACACAGATTCACAACCATATGATAAACCCTTGGATTCTAAATCCAGAAGGGTTGTATCAAGGACACAAAGTGCATCAATTTCTATTCCTATGAGCTACATGGAGTCATATGAGAGAGAAACTAGTCATGTAGGACATACAGGTCCACTTCGGATTAAGAGAAAAACTCCCTTTATGCAGATGAGTGGTCCACTATATGCTACCAATGGACCTGGAAATCTTTTGCAGCAGCATATAGCTGGAACAGGAAACAAAGCAGAGGAAAGAAAGACAGAAAATTTTGCTACTTTCAGCGGCACAGGTTCAACTTACTGGAATAATAACCATGGTAGAGAAAATGAACACTTACTGAGGTCTGGACAACTGGGAATGTGTAATGATCCTTATTGTACTATTTGCCCTACTCACTTCAATGTTTCTCAGCAAAGAAATTCAAAACCTTCAACTATATGTGATCCCAAGTTCCATAATGATCTTTATGGGGATGCCAAGGGATTCGCAAGAAAGCTCTTTTCTTTCTGCTCTTCATATGTTCCTGGAGTTATGAACCCTCACACCAAAATTGTACAAAAATGGAACAAGTCTTTGGCCATTTTTTGCTTGACTGCTATTTTTGTGGATCCATTATTTTTCTTCTTGCTCTATGTGCAGCAGGATTATAATTGTATTGTTATCAACTGGACTATGACAACAGCACTTGTTTTACTTAGAAGCATGAATGATTTGGTATATTTCTTTAACATTCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTTGACCATCCTAAGCAAATTGCTCTTCATTACATGAAGGGTTCTTTTCTTGTTGATTTGTTTGTTGTATTTCCTCTTCCTCAGATAATGATATTGTTTGTGATACCAAATTCCTTGGGGGGAGCAAATTATGCAAAGAATCTTCTCCGTGCAGCAATCTTAGTGCAGTATATTCCAAAGTTGTACAGGTTTCTGCCACTGCTAATTGGCCAGAATCGAACAGGATTCATATTTGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTCGTTTTCATGCTTGCTAGCCATGTTGTTGGCTCTTGCTGGTACCTCTTTGGTCTACAGAGGGTTAATCAATGTTTGCGAGATGCCTGCCATAATTCTAATATTACTGGATGCATGAAATTCATTGATTGTGGACATGGCCTTAATGGAAACAATCAGTCTGACCTAACATCAGATCAGTGGAACAAGAATAAAGATGCCATTGATTGTCTGAATCCCCCTCCTGATGGTGGATTTAGTTATGGCATCTATCAGAATGCTGTGCAGCTTACTGTTGAAACTAACGTGGTTAACAAATATGTGTATTCTCTTTTTTGGGGATTCCAGCAAATCAGTACTCTAGCTGGTAATCTAGTCCCTAGCTATTTTGTGGGGGAAGTCCTTTTTACTATGGCCATCATAGGATTAGGACTCTTGCTTTTTGCGATTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGCAGGAAGCTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGGTCTAAGAAGGAGAGTAAGACAAGCTGAACGGTATACTTGGGCTGCAACAAGGGGAGTTAATGAAGAAATGCTTATGGAGAATTTGCCTGAGGATCTGCAGAGAGACATAAGACGTCATCTTTTCAAATTTGTTAAGAAAGTTCGAATTTTCGCCCTGATGGATCAGCCTATCTTAGATGCTATTTGTGAGAGACTCAAACAAAAGACATACATCAAAGGAAGTAGAATTTTGTGCCAGGGTTGTCTAGTACAGAAGATGGTATTCATTGTGCGTGGTAAATTGGAGAGTGTTGGAGAAGATGGAATTAGAGTTCCCTTAGCCGAAGGAGATGTTTGTGGTGAAGAACTTCTGACATGGTATCTTGAATATTCTTCTATAAGCACAGATGGTAGAAAAATAAGGCTCCCAGGACAGAGGTTGGTTGGCAATAGGAATGTAAGGTGCTTAACAAATGTGGAGGCATTTTCACTCTGTGCTGCAGAACTTGAAGAGGTCACAATTCTTTTCACAAGATTCTTGAGGAGTCCACGTGTTCAAGGAGCCTTAAGGTATGAATCACCTTATTGGAGATCCCTTGCAGCAACCCGGATTCAAGTTGCATGGAGATACCGGAAGAAACGTCTAAGTCGTGTTAATTCTTCAGTTTCACTATCAGATTAA 2316 0.399 MANFDNDELPILSDTDSQPYDKPLDSKSRRVVSRTQSASISIPMSYMESYERETSHVGHTGPLRIKRKTPFMQMSGPLYATNGPGNLLQQHIAGTGNKAEERKTENFATFSGTGSTYWNNNHGRENEHLLRSGQLGMCNDPYCTICPTHFNVSQQRNSKPSTICDPKFHNDLYGDAKGFARKLFSFCSSYVPGVMNPHTKIVQKWNKSLAIFCLTAIFVDPLFFFLLYVQQDYNCIVINWTMTTALVLLRSMNDLVYFFNILLQFRLAYVSPESRVVGAGDLVDHPKQIALHYMKGSFLVDLFVVFPLPQIMILFVIPNSLGGANYAKNLLRAAILVQYIPKLYRFLPLLIGQNRTGFIFESAWANFIINLLVFMLASHVVGSCWYLFGLQRVNQCLRDACHNSNITGCMKFIDCGHGLNGNNQSDLTSDQWNKNKDAIDCLNPPPDGGFSYGIYQNAVQLTVETNVVNKYVYSLFWGFQQISTLAGNLVPSYFVGEVLFTMAIIGLGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPEGLRRRVRQAERYTWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKVRIFALMDQPILDAICERLKQKTYIKGSRILCQGCLVQKMVFIVRGKLESVGEDGIRVPLAEGDVCGEELLTWYLEYSSISTDGRKIRLPGQRLVGNRNVRCLTNVEAFSLCAAELEEVTILFTRFLRSPRVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSVSLSD 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2996g00002 771 MobiDBLite consensus disorder prediction 1 37 - -
Gabi2996g00002 771 Gene3D - 204 526 - -
Gabi2996g00002 771 CDD CAP_ED 601 717 IPR000595 -
Gabi2996g00002 771 SUPERFAMILY cAMP-binding domain-like 529 670 IPR018490 -
Gabi2996g00002 771 ProSiteProfiles cAMP/cGMP binding motif profile. 601 669 IPR000595 -
Gabi2996g00002 771 Gene3D Helix hairpin bin 528 593 - -
Gabi2996g00002 771 Pfam Ion transport protein 207 528 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gabi2996g00002 771 Gene3D Jelly Rolls 599 723 IPR014710 -
Gabi2996g00002 771 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 138 761 - -
Gabi2996g00002 771 SUPERFAMILY Voltage-gated potassium channels 197 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2996g00002 Gabi-Chr2996 8616 21141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2996g00002 5 679 Ion Channels AT3G17700 60.793 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2996g00002 K05391 - gmx:100795427 1278.46