Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2996g00001 ATGACCACTAATCAAGCCACTTCAGCGGATGAGGATCCAGTAAGTTATATTGACTGCAGTGAAGATTGCATTCCAAATGACTTATCTAATGAAATGGAATATGGTGAAATCAAAGATTCCAGAAATGATGAAATAGAAGATGATATACCTAATGACTTGTCTGATAATAAGTTTAATGACATTCTATTATCACCAACAAAGAGTACTACTGTTATGATTGAGGTTGGAATGAAATTTTCCGAACAAAAGGATATATTAGACTTGTATACAACATTTGGGAAGGCAAAAGGTTTTGGAATTCGGAAAAGAACATCCAACGAGAACTACGTGATGCTAACATGTGTTAGAGAGGGCTATCATCAACCGAGAAAGGGAAAAGATGTGCGTGAATTGTGTGCAACCAAACCAAGGCGGACATCATCATCACGTATGGGGTGTGAAGCTTGTCTCAAGGCTTCTAGAGAGAGAAAAACAAAAATGTGGAAAATCACATATTTCATTGACAAGCATAACCATGAGATGGTTACTCCAAAAAGTGTTTCATATTTGAGATCACATAGAAAAATGCCCGATGCTGCAAAATGTTTGATAGAAGAATTCAATAACGCGGGTTTGCCTACTGGAAAGGTGGCCACCATCTTCAAAAGCCATGATTTAGGGTTTGACAGTCGAGATTGTTATAATCATATGAAAAATGTGAGGAGAAGGGTATACGATATCGGGGATGCACAAGTTGTGCTACTTTATTGTATTAAACAACAATCACTGAATCCTAGTTTTTTTTATTCTATTATGTGTGACGATGATGATCGTATGGTTAGTTTTTTTTGGATTGATGCAAGATCCAGGCACGCCTATGAGCTTTTTGGGGATGTCATCACATTTGACACAACATATAGGACTAATAAGTATTCCATGCCATTTGGACCCTTTGTTGGTGTAAATAATCATTTGCAGTCCCTCTTATTTGGATGTGCTTTATTACACGATGAGACTGAGGATAGTTTTGTATGGCTTTTTGAGGAATGGCTTCGAGCAATGAATGGAAAACATCCAGTTGCCATAATTACTGATCAAGACTTGGCGATTAGCAATGCAGTCTCCAAAGTTTTTCCAAATACGAAACACAGATTTTGTTTGTGGCATATCATGAAAAAGTTTCCAGAAAAGTTATCTCATCTCTACCATGACCACGCATCATTTAAAAGGCATTTGAATGACTGTATTTGGAGCTCCAAGAGCACTCAAGAGTTTGAAGATAGATGGCAAAGATTTCTTATTCAGTATGGTCTTATTGAAAATGAGTGGTTGAATGTACTTTATACAATTAGATCCTCTTGGGTACCAATCTTTAACCATTCCACTTTCTTTGCTGGTATGAACACTACTCAACGTAGCGAAAGTATAAATTCATTTTTTGATGGTTTTGTTACATCTGGCACAACTTTAAAGGAATTTGTGGAGAAATATAATCAAGCAATAGATGCTCGCTACGAGTCATTTAAAAAAGAAGACTTTGAATCTAGGCACAAAGAAAGGATTTTGACATTTAATATGCCATTGGAGGAGCATGCTGCTAAAATTCCTGAACACTTCATTCTGCAGCGTTGGAGCAAGGAAGGAAATGTGATACCAAGCGGAGAGAAGGACAGATGTACCGCAAATGGAGATAGACTTCTTCGCAGCTTTCATCTACGCTCTAGATATTCCAAACTTGATGACCTTGCATATAAGTCAGATGAAGCTTTTAAATTAATTTGTGATGGTATTGATTCTCTCTATAAAGCAGCAGAAAAAGTTCTAGCGTGCGAAGAGAGTAGTGGTCTTGGGGATTCTAATTTACAGTTGTTGGGTTTTCATCATGAAGAGCCTTCTATGATGTACTTGAAGGATCCAAATATTTCACAAACGAAAGGGCGGAAAAGGGACTCACAAAGTACTTCACAGGGACACAGGATTCGTAGCGGGATTGAAGAAGCATCAAAGCATACTAATATTTGTGGCAATTGTAAGAAGCGGGGACATAATAAACGCACATGCAAAGAATATATAGATGCAATACATTCAATGTTGAGCAAACAACATTGA 2088 0.3731 MTTNQATSADEDPVSYIDCSEDCIPNDLSNEMEYGEIKDSRNDEIEDDIPNDLSDNKFNDILLSPTKSTTVMIEVGMKFSEQKDILDLYTTFGKAKGFGIRKRTSNENYVMLTCVREGYHQPRKGKDVRELCATKPRRTSSSRMGCEACLKASRERKTKMWKITYFIDKHNHEMVTPKSVSYLRSHRKMPDAAKCLIEEFNNAGLPTGKVATIFKSHDLGFDSRDCYNHMKNVRRRVYDIGDAQVVLLYCIKQQSLNPSFFYSIMCDDDDRMVSFFWIDARSRHAYELFGDVITFDTTYRTNKYSMPFGPFVGVNNHLQSLLFGCALLHDETEDSFVWLFEEWLRAMNGKHPVAIITDQDLAISNAVSKVFPNTKHRFCLWHIMKKFPEKLSHLYHDHASFKRHLNDCIWSSKSTQEFEDRWQRFLIQYGLIENEWLNVLYTIRSSWVPIFNHSTFFAGMNTTQRSESINSFFDGFVTSGTTLKEFVEKYNQAIDARYESFKKEDFESRHKERILTFNMPLEEHAAKIPEHFILQRWSKEGNVIPSGEKDRCTANGDRLLRSFHLRSRYSKLDDLAYKSDEAFKLICDGIDSLYKAAEKVLACEESSGLGDSNLQLLGFHHEEPSMMYLKDPNISQTKGRKRDSQSTSQGHRIRSGIEEASKHTNICGNCKKRGHNKRTCKEYIDAIHSMLSKQH 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2996g00001 695 MobiDBLite consensus disorder prediction 631 655 - -
Gabi2996g00001 695 Pfam MULE transposase domain 292 386 IPR018289 -
Gabi2996g00001 695 MobiDBLite consensus disorder prediction 639 654 - -
Gabi2996g00001 695 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 72 585 IPR031052 GO:0006355
Gabi2996g00001 695 Pfam FAR1 DNA-binding domain 88 175 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2996g00001 Gabi-Chr2996 968 3355 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi2996g00001 MULE 1.2e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2996g00001 - - vvo:131657854 569.696