Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2995g00052 ATGGAGAACAAGAAGCTTCAGCGTCGCTTCTCGCTGGGTAGGCAATCCTCTATGGCGCCGGAACGCGACGATGCCGGCGCCGGCGAGGATGAGTTGTCGGAGGCTTTGGACCCGTCGGTTCGGTTGATGTATTTGGCGAACGAAGGGGACTTGGATGGGATTAAGGAGTTGTTGGATGGAGGGAGTGACGTCAATTTCAGAGACATTGATGGCCGCACCGCTCTACATGTCGCCGCCTGTCAGGGCCGTACCGACGTCGTCGACTTGTTGCTCCGACGAGGTGCTCAGGTTGACCCACGCGACCGCTGGGGCAGCACCCCTCTAGCAGATGCGTTGTACTACAAAAATCATGATGTTGTAAAACTTTTGGAGAAACATGGTGCACAACCCCCGATGGCTCCCATGCATGTCCAAAATGCTCGTGAAGTCCCAGAATATGAGATTGATCCTTCTGAGCTTGATTTTACTAATAGCGTTTGCATAACAAAGGGGACTTTCCGGATTGCATTGTGGCGTGGAATTCAAGTTGCTGTCAAAACTTTTGGGGAGGAAGTGTTCAACGATGATGAAAAAGTAAGGGCATTTCATGATGAGCTTACATTACTTCAGAAAATAAGGCATCCAAATGTTGTCCAGTTTTTGGGCGCTGTAACGCAAAGCACCCCGATGATGATTGTCGTAGAATATCTACCCTTGGGTGATCTTCGTGCTTACTTGAAGCAGAAACGTGCATTAAAACCGATAACAGCTGTGAAGTTTGCACTTGATATTGCTAGGGGAATGAATTATTTGCATGAACATAAACCAGAAGCTATTATACACCGAGATCTTGAGCCTTCAAATATACTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAATTACTCAAAGTTGCTAAAACAGTCAAAGAAGACAAACCTGTGACAAGCCAGGACACATCATGGCGCTATGTTGCTCCAGAGGTCTATAGAAATGAGGAATATGACACCAAAGTGGATGTGTTTTCATTTGCTCTGATATTACAGGAGATGATTGAAGGTTGTCTTCCTTTTCATGCAAAGCCCGAAAGTGAAGTTCCTAAAGCATATGTTGAAAATGAGCGTCCACCATTCAGAGCTTCACAAAAGCTTTATGCTTATGGACTAAAACAATTAATTGAGGAATGTTGGGATGATAAACCATACAGAAGACCAACATTTAGGCAAATAATTGGAAGATTGGAAGACATTAGCTACCATCTTGATCAAAAGAGTCAATGGAAGGTTCTGACTCCTAAATGTATCCCGAATCTGAAAGCCCTATTCAAAGGGCATCGCACAATTCCAAGTAGCCGATCATCTCGCTTTACGACCGGATAA 1374 0.452 MENKKLQRRFSLGRQSSMAPERDDAGAGEDELSEALDPSVRLMYLANEGDLDGIKELLDGGSDVNFRDIDGRTALHVAACQGRTDVVDLLLRRGAQVDPRDRWGSTPLADALYYKNHDVVKLLEKHGAQPPMAPMHVQNAREVPEYEIDPSELDFTNSVCITKGTFRIALWRGIQVAVKTFGEEVFNDDEKVRAFHDELTLLQKIRHPNVVQFLGAVTQSTPMMIVVEYLPLGDLRAYLKQKRALKPITAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTSQDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGCLPFHAKPESEVPKAYVENERPPFRASQKLYAYGLKQLIEECWDDKPYRRPTFRQIIGRLEDISYHLDQKSQWKVLTPKCIPNLKALFKGHRTIPSSRSSRFTTG 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2995g00052 457 FunFam Integrin-linked protein kinase family 22 146 - -
Gabi2995g00052 457 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Gabi2995g00052 457 SUPERFAMILY Ankyrin repeat 41 133 IPR036770 -
Gabi2995g00052 457 Pfam Protein tyrosine and serine/threonine kinase 172 411 IPR001245 GO:0004672|GO:0006468
Gabi2995g00052 457 SMART ANK_2a 103 132 IPR002110 GO:0005515
Gabi2995g00052 457 SMART ANK_2a 37 66 IPR002110 GO:0005515
Gabi2995g00052 457 SMART ANK_2a 70 101 IPR002110 GO:0005515
Gabi2995g00052 457 CDD STKc_MAP3K-like 169 412 - -
Gabi2995g00052 457 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Gabi2995g00052 457 Gene3D - 23 158 IPR036770 -
Gabi2995g00052 457 SUPERFAMILY Protein kinase-like (PK-like) 160 415 IPR011009 -
Gabi2995g00052 457 FunFam serine/threonine-protein kinase STY46-like 148 231 - -
Gabi2995g00052 457 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 100 420 - -
Gabi2995g00052 457 Gene3D Transferase(Phosphotransferase) domain 1 159 421 - -
Gabi2995g00052 457 PIRSF ILK 2 434 - -
Gabi2995g00052 457 MobiDBLite consensus disorder prediction 1 32 - -
Gabi2995g00052 457 FunFam Os01g0748600 protein 141 432 - -
Gabi2995g00052 457 ProSiteProfiles Protein kinase domain profile. 120 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2995g00052 457 Pfam Ankyrin repeats (3 copies) 42 130 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2995g00052 Gabi-Chr2995 382839 389058 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2995g00052 1 435 MAP Kinase Kinase Kinase AT4G18950 66.591 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Gabi2995g00052 PK_Tyr_Ser-Thr 3.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2995g00052 - - gmx:100795964 803.127