Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2995g00034 ATGTTTGAGGATATTATCTATTTTATCTTTTGTGCCTTGTTTCCCCTGCTTGCACTAGTCTCTTTCAATTTCTTGAGGCAAAAACAATGCTGTAACAAAGACAAAAGAAAGCTACCACCAGGGGAAATGGGGTTCCCCTTGATTGGGGAGACAATGGAGTTCTTCAATGCTCAAAGGAGAAACCAACTGTTTGAAGATTTTGTTCATCCTCGCATTCTGAAACATGGGAAAATCTTCAAAACAAGGATAATGGGGTCTCCAACTGTGGTTGTGAATGGAGCTGAAGCCAATAAATTTTTATTGTCTAACGAGTTCAAGTTGGTCAAAAGCTCTTGGCCTTCTTCCTCAGTCCAGCTCATGGGAAGCGACTCTATCATGGAGAAAGACGGTGACCGGCACCGCTTCCTCCGCGGTGTTATTGGCACCAGCCTTGGCTATGCTGGACTTGAGGTACTAGTTCCAAAGTTGTGCAATTCTGTTAAGTTGCATTTATCTTCAAACTGGCAGGGCCAAGAAAAGATTAGCCTTTATCGTTCAACAAAAGTCCTGACATTTAGCATAGTGTTTGAGTGCTTGTTGGGGATTAATGTGGAGCCAGGTATGCTAGATACCTTTGAAAGAGTGTTGGAAGGAGTATTTTCTCCAGCAATTATGTTTCCAGGTTCAAAATTTTGGAGAGCAAAAAAAGCCAGGTTGGAGATAGAAAAGATGTTGGTCAAAGTGGTAAGAGAGAAGAGAAAAGAAATGGAAGAAAGCTTGCAAAGAGAAGAAGATGGAATGCTGCTTTCTAAATTGGTATCTGGGATGATCCAAGGGGAGATCAGTGAAAAAGAGGTCATAGACAATGTGGTGCTGCTAGTTTTTGCAGCTCATGATACTACTTCTTTTGCTGTTGCTATGACATTCAAGATGTTGGCTCAGCATCCTGATTGCTATAGTAAACTTCTTCAAGAACATGTTGATATAATGAGCAACAAAAGTGGGGGTGAGAATCTCACAGTTGAGGACATAAAGAAGATGAAGTATACCTGGCAAGTTGCTAGAGAAAGCATGAGACTGTTCCCTCCAATCTTTGGCTCATTCAGGAAGGCAATTACTGATATTGAATATGAAGGATTCACTATACCAAGAGGATGGAAGGTGCTATGGACAACATATGGTACACATTATAATGAAAAGTATTTTAAGGATCCTATGAGTTTCGACCCAAGTAGGTTTGAGGAGGGAATACCCCAATATGTGTTTGTTCCCTTTGGAGGAGGGCCAAGAGTGTGTGCAGGGTACCAATTAGCCAAGTTAAATATCCTTATCTTTGTGCATTATGTTGTGACACAATATGAGTGGTTCTTACTGTATCCAGATGAGCCAGTCACAATGGATCCCCTGCCCTTCCCTTCTCTTGGAATGCCCATCAGAATTTCTCCCAAGTTTACATGA 1437 0.4141 MFEDIIYFIFCALFPLLALVSFNFLRQKQCCNKDKRKLPPGEMGFPLIGETMEFFNAQRRNQLFEDFVHPRILKHGKIFKTRIMGSPTVVVNGAEANKFLLSNEFKLVKSSWPSSSVQLMGSDSIMEKDGDRHRFLRGVIGTSLGYAGLEVLVPKLCNSVKLHLSSNWQGQEKISLYRSTKVLTFSIVFECLLGINVEPGMLDTFERVLEGVFSPAIMFPGSKFWRAKKARLEIEKMLVKVVREKRKEMEESLQREEDGMLLSKLVSGMIQGEISEKEVIDNVVLLVFAAHDTTSFAVAMTFKMLAQHPDCYSKLLQEHVDIMSNKSGGENLTVEDIKKMKYTWQVARESMRLFPPIFGSFRKAITDIEYEGFTIPRGWKVLWTTYGTHYNEKYFKDPMSFDPSRFEEGIPQYVFVPFGGGPRVCAGYQLAKLNILIFVHYVVTQYEWFLLYPDEPVTMDPLPFPSLGMPIRISPKFT 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2995g00034 478 Pfam Cytochrome P450 39 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2995g00034 478 Gene3D Cytochrome P450 27 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2995g00034 478 SUPERFAMILY Cytochrome P450 35 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2995g00034 478 PANTHER CYTOCHROME P450 26 35 461 - -
Gabi2995g00034 478 CDD CYP90-like 71 475 - -
Gabi2995g00034 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Gabi2995g00034 478 FunFam Taxadiene 5-alpha hydroxylase 29 476 - -
Gabi2995g00034 478 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2995g00034 478 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2995g00034 478 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2995g00034 478 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2995g00034 478 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2995g00034 478 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2995g00034 478 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2995g00034 478 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2995g00034 478 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2995g00034 478 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2995g00034 478 Coils Coil 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2995g00034 Gabi-Chr2995 249991 251646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2995g00034 38 381 Cytochrome P450 AT2G42850 67.733 4.13e-165 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2995g00034 - - gmx:100793336 867.455