Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2995g00024 ATGAGGCCACAGCAAGAACTTGATTTCAATCCCAATCATCTCAAACTATATTACGGAAAGCTGTTTCCTTTTGCTGATATATATAGATGGATGTCTTATGGCAATGATGGGAAGCACCCTGGTTGTGATGAATCTTACTCTAGCCGAAGAGAGTTTGCCTTCACGCTGGACAATGATATATTTGTGCGTTTCCAATCTTTCAACAATGCCCTCGATTTCGAAAAATCTATCAAAGATAAGTCCCCTTTAAAGATTGATATGGGACCTGTCTACAATGTCGAGCCTGCAAAAAGGCAAGCCTATGCACAGATTGATCCAGTTGAGAGGGAGTTGATTTTTGATATTGATATGACAGACTATGATGATGTTCGATATTGCTGCTCTGGTGCTGACGTTTGCTTGGATTGCTGGCCATTGATGACTATAGTTATCAAAGTGATTGATACTTCCTTAAGAGATGACTTTGGTTTCAAACACATTCTCTGGGTCTATAGTGGACGTAGGGGTGTTCATTGTTGGGTCTGTGATGGGAGGGCAAGAAGGTTGACCAATGAGAAAAGAGCTGCCATTGCTGACTACTTTTGTGTATATAAGGGCAATGAAAATAGTCACAAGAAAGTTTCTTTGACGGGTGCCACTCTTCATCCTTTCTTGGCGACATCATACACTAATGTTCTCAAGGACTTTTTTGAGAAAAAACTGCTTATAAGTCAAAATATTCTTGCTACTGAGGAGAGATATGAGAAGATCCTAAACATGATTCCTGATGAATCTATTGCTTCTGAACTTAGGGGAAAGTGGCAAGAGGGTAGGCGAACCTCTAGTGCAAAAGAAGACATTAATGTTGTTCGTTGGGAACAGTGCAAACAGTTGCTGCAATCTGGAAAACATAAGGCACAAGGGCTGCGTAGGTGCGTTGAAGAGATTGTGTTCTTTTTTACTTACCCCAGGCTAGATATGGAGGTTACAAAACATATGAACCATTTGCTTAAAGCACCGTTCTGCGTACATCCAAACACGGGCCGTATTTGTGTCCCTATTGATCCAAATCGGTGCGAGGAGTTTGATCCTACTACAGTACCCTCCCTTTCGCAGCTTTTAGAAGAGCTTAATAATGAAGGCATGAGAGCTGATGTGGATGAATGGGATGGAACTTCGCTTGGAAATGCCATTACGCTTTTCAGATCGTCATTTTTACAGCCTTTGCTAAAAGCCTGCAAGGAGGAGATAGAAAGTTCCTATAACTTAAAATTGCAACAGTCAAAGAACTCCCTCGGTTGGTAG 1284 0.4143 MRPQQELDFNPNHLKLYYGKLFPFADIYRWMSYGNDGKHPGCDESYSSRREFAFTLDNDIFVRFQSFNNALDFEKSIKDKSPLKIDMGPVYNVEPAKRQAYAQIDPVERELIFDIDMTDYDDVRYCCSGADVCLDCWPLMTIVIKVIDTSLRDDFGFKHILWVYSGRRGVHCWVCDGRARRLTNEKRAAIADYFCVYKGNENSHKKVSLTGATLHPFLATSYTNVLKDFFEKKLLISQNILATEERYEKILNMIPDESIASELRGKWQEGRRTSSAKEDINVVRWEQCKQLLQSGKHKAQGLRRCVEEIVFFFTYPRLDMEVTKHMNHLLKAPFCVHPNTGRICVPIDPNRCEEFDPTTVPSLSQLLEELNNEGMRADVDEWDGTSLGNAITLFRSSFLQPLLKACKEEIESSYNLKLQQSKNSLGW 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2995g00024 427 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 15 367 IPR014052 GO:0003896|GO:0006269
Gabi2995g00024 427 Pfam DNA primase small subunit 113 348 IPR002755 GO:0003896|GO:0006269
Gabi2995g00024 427 FunFam DNA primase 2 408 - -
Gabi2995g00024 427 Gene3D DNA primase, PRIM domain 2 408 - -
Gabi2995g00024 427 CDD AE_Prim_S 23 357 IPR014052 GO:0003896|GO:0006269
Gabi2995g00024 427 SUPERFAMILY Prim-pol domain 10 372 - -
Gabi2995g00024 427 PANTHER DNA PRIMASE SMALL SUBUNIT 7 412 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2995g00024 2 427 Core DNA Replication Machinery Family AT5G41880 64.434 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2995g00024 K02684 - gmx:100780574 757.288