Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2995g00018 ATGTTTGGTGAAATGGATCAAAAGCAAGAGCAAGAAGAGGGGAACACCAAAATGTCTGGCTTTGATGTTACTCTAATATCTCCCAAAGTTCCAAAAGCAGTTTCACCAGTATCTTCTGCAGCAGATGGTGAAACCTTAAGGCGACCTCGTGGCAGGCCAGCTGGCTCTAAGAACAAACCTAAGCCACCAATAATTGTGACAAGGGATAGTGCTAATGCACTCAAGGCTCATGCCATGGAAGTTAGCTCTGGCTGTGATGTGAATGAAAGTTTGTTGAACTTTGCAAGGAGAAAGCAACGTGGCCTTTGCATACTTAATGGTACTGGCTGTGTAACAAATGTAACATTGCGCCAACCAGCCTCATCTGGTGCCATTGTTACCCTTCATGGTCGATTTGAGATTCTCTCATTGCTGGGGTCAATCCTTCCTCCACCAGCACCACCAGGGATCACTGGTCTTACAATTTACTTAGCAGGTGCTCAAGGGCAAGTTGTTGGAGGTGGTGTTGTTGGTGCTTTGATTGCTTCTGGCCCTGTTGTTATCATGGCTGCATCATTCATGCATGCTACTTTTGATCGTCTTCCATTGGAAGATGATGAACTTGCTGCTGCTGTAATGCAGAATCAGCATTACCAAAATGGACGCACCCATCATCTTGATATCCCTGACTTATATGCAGTGCCACAGAACCTGCTCATGAATGCTACAATGCCCCCGGAGATATACTCCTGGGCACCCGGGAGGAACTTGTCCAAAACCTGA 762 0.4633 MFGEMDQKQEQEEGNTKMSGFDVTLISPKVPKAVSPVSSAADGETLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLCILNGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGGVVGALIASGPVVIMAASFMHATFDRLPLEDDELAAAVMQNQHYQNGRTHHLDIPDLYAVPQNLLMNATMPPEIYSWAPGRNLSKT 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2995g00018 253 MobiDBLite consensus disorder prediction 1 15 - -
Gabi2995g00018 253 ProSiteProfiles PPC domain profile profile. 71 209 IPR005175 -
Gabi2995g00018 253 FunFam AT-hook motif nuclear-localized protein 74 216 - -
Gabi2995g00018 253 Gene3D - 73 219 - -
Gabi2995g00018 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 212 IPR014476 GO:0003680
Gabi2995g00018 253 MobiDBLite consensus disorder prediction 1 64 - -
Gabi2995g00018 253 Pfam Plants and Prokaryotes Conserved (PCC) domain 76 186 IPR005175 -
Gabi2995g00018 253 SUPERFAMILY AF0104/ALDC/Ptd012-like 71 205 - -
Gabi2995g00018 253 CDD DUF296 77 157 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2995g00018 Gabi-Chr2995 140500 141624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2995g00018 30 252 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 74.222 1.33e-103 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2995g00018 - - gmx:100804941 421.009