Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2995g00016 ATGCAGGAGCCCCTTCTGAGTCTTTTCTCCAGGAAAGAAGCAGCAGAATCACCAAGAACGTCATCACCCAAGGAACAATCTGTCCATGATGATCATGTTCTTGCTTCATCACTAGGCCAATCTAGTTCACCTCATATCATCAATGAAGCCAAGAATCCTCCTCCTTATATTAACCTCATAGCCAACTTGAGCATCAGGAAAGGGAAGATTAATCATCGCTCTCGCTCTGCTCCATCTGTATTATTCACTGACACTCGGGTAGATTTTCATGAGCCCTCTGAACCCAAACCTTCACGTAAGTCGTCATCAACTTTAATAGTTAGGCTATCATTCATTGGTGTTTTCTTGTATGTGGCAACTGGGGTTATAGTGTATATGAGTAGTGGAAGTGGAAGTTTCAAGGGCACTACCACATTCATGCCTGTAGATGCTGCTTACTTTACAATGGTAACTCTCTGCACAATTGGGTATGGAGATATTGTTCCAGACACCACATTTACCAAGATCTTTACATGTGGTCTCATTTTAGTGGGGTTTGGATTTATTGGTTTTCTGCTCAATGGGTTAGTTGCATACATTTGTGACACACAAGAGGCATTCTTATTGAATATGATGGATGAGAATCGATATAAGAAAATTCTGAGTACGTATATGGTTGATGAAGAGAAAGGGAGAATGAGGATAAGAACCAAAGTTTGTCTGGCATTGGTTGTTGTCATTGGTTGCATTGCTATAGGAACATTTACGGTGCATTTTGTTGAGGATCTGAACTGGGATGACAGCTTTTATCTCTCCATTACCTCTGTTACAACAGTTGGTTATGGGGATTATTCTTTCAAAACTGTAACCGGCAGATGTTTTGCTATTATATGGCTTTTGGTAAGCCCGTTGGCAGTTACACGGGCCTTTTTATACCTCACTGATTATAGCATGCACAAGAGAAACCGTCAGGTGGCAAAATGGATTCTACACAAGAAGATAACCTTATCAGATTTAGTAGCTGCAGACCTTGATAACGATGGTTCAATCAGTAAATCTGAATTTGTTATATACAAGCTTAAGCAAATGGGGAAGATAACTGAGATAGACATTATACAAATAAGCAAGCAATTTGATTCCTTGGAATGTGGCATGTATGGAAAGATTACTCTTGCTGACCTCATGGATACTATCTAA 1176 0.3988 MQEPLLSLFSRKEAAESPRTSSPKEQSVHDDHVLASSLGQSSSPHIINEAKNPPPYINLIANLSIRKGKINHRSRSAPSVLFTDTRVDFHEPSEPKPSRKSSSTLIVRLSFIGVFLYVATGVIVYMSSGSGSFKGTTTFMPVDAAYFTMVTLCTIGYGDIVPDTTFTKIFTCGLILVGFGFIGFLLNGLVAYICDTQEAFLLNMMDENRYKKILSTYMVDEEKGRMRIRTKVCLALVVVIGCIAIGTFTVHFVEDLNWDDSFYLSITSVTTVGYGDYSFKTVTGRCFAIIWLLVSPLAVTRAFLYLTDYSMHKRNRQVAKWILHKKITLSDLVAADLDNDGSISKSEFVIYKLKQMGKITEIDIIQISKQFDSLECGMYGKITLADLMDTI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2995g00016 391 Gene3D - 194 334 - -
Gabi2995g00016 391 PRINTS Two pore domain K+ channel signature 270 279 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gabi2995g00016 391 PRINTS Two pore domain K+ channel signature 150 178 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gabi2995g00016 391 MobiDBLite consensus disorder prediction 17 31 - -
Gabi2995g00016 391 FunFam Two-pore potassium channel 2-like 105 203 - -
Gabi2995g00016 391 SUPERFAMILY Voltage-gated potassium channels 207 326 - -
Gabi2995g00016 391 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 142 364 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gabi2995g00016 391 Gene3D - 95 193 - -
Gabi2995g00016 391 SUPERFAMILY Voltage-gated potassium channels 103 193 - -
Gabi2995g00016 391 MobiDBLite consensus disorder prediction 1 34 - -
Gabi2995g00016 391 Pfam Ion channel 114 192 IPR013099 -
Gabi2995g00016 391 Pfam Ion channel 238 306 IPR013099 -
Gabi2995g00016 391 ProSitePatterns EF-hand calcium-binding domain. 336 348 IPR018247 -
Gabi2995g00016 391 FunFam Two-pore potassium channel 3 215 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2995g00016 Gabi-Chr2995 127175 129260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2995g00016 67 389 Ion Channels AT4G18160 48.607 1.57e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2995g00016 K05389 - gmx:100789639 574.704