Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2995g00014 ATGGAGAATGAAAAGGATCGTTTCGATCCCTTTTATTACAACAACCATGAACTCAACCACTCAATAAGCTTTCCATTCTTTAGGGACAACCATTCAACAATACCCTCACAAAATTTTCAAGGGTTTGATCCCTCTAGTACCAGTTTCACTGATTGCTTACATGGTTCCATGGACTACAACACTCTCTCAAGAGCCTTTGACTTGTCTTGCTCATCATCTGAAGTGATCTCCCCCATTGACGACAACCTTAAGAAACCCACTCTAGGAAATTCAGTGGGGATCAGTGGGAAGCAATTATCAACACCCAATTCCTCTGTGTCTTCCTCATCTAATGAAGCAGAAGCAGTAACAGAAGAAGACTCAACCAAAAGCAAGAAAGAAAAGCAGTCAAAAGGGTGTGAAGATCATGGAAATGAAGACTCTACGAAAGAGAACAAGCCCAAAAAGAAAGAGAAAAAGCCAAGAGAGCCACGCTTTGCCTTCTTGACTAAAAGTGAGATCGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGTCCATACCCAAGGAGCTATTACAGATGCACCAGTCAGAAGTGCACTGTGAAGAAAAGGGTGGAGAGATCATTCCAAGACCCAGCAATCGTGATCACAACATATGAAGGGCAGCACAACCATCACTGTCCGGCGACACTCCGGGGAAATGCCGCCGGCATGTTGTCATCACCTTCCCTTTTTGGTTCCACATATTTGAGGCCAAATTTACCCCAAGATTTCCTAGCTCAGTTGCTTCCAAGTTATAGCCAAGATGATCACCAAAACCCCATGTTCAACCAAAACCTTGGCCATTCTCAGCCTCAACAACAACAACAACAACAGCAGCAGTTCCAACTCCCTCATGACTATGGGTTGTTACAAGACCTATTGCCATCATTCCCACGCAGACAAGAGCCATGA 960 0.4385 MENEKDRFDPFYYNNHELNHSISFPFFRDNHSTIPSQNFQGFDPSSTSFTDCLHGSMDYNTLSRAFDLSCSSSEVISPIDDNLKKPTLGNSVGISGKQLSTPNSSVSSSSNEAEAVTEEDSTKSKKEKQSKGCEDHGNEDSTKENKPKKKEKKPREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCTVKKRVERSFQDPAIVITTYEGQHNHHCPATLRGNAAGMLSSPSLFGSTYLRPNLPQDFLAQLLPSYSQDDHQNPMFNQNLGHSQPQQQQQQQQQFQLPHDYGLLQDLLPSFPRRQEP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2995g00014 319 Gene3D WRKY domain 156 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2995g00014 319 SUPERFAMILY WRKY DNA-binding domain 163 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2995g00014 319 ProSiteProfiles WRKY domain profile. 165 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2995g00014 319 MobiDBLite consensus disorder prediction 94 160 - -
Gabi2995g00014 319 FunFam WRKY transcription factor 57 156 230 - -
Gabi2995g00014 319 MobiDBLite consensus disorder prediction 269 297 - -
Gabi2995g00014 319 SMART WRKY_cls 170 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2995g00014 319 MobiDBLite consensus disorder prediction 94 115 - -
Gabi2995g00014 319 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 293 IPR044810 GO:0003700
Gabi2995g00014 319 MobiDBLite consensus disorder prediction 116 160 - -
Gabi2995g00014 319 Pfam WRKY DNA -binding domain 171 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2995g00014 Gabi-Chr2995 103354 106124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2995g00014 1 319 WRKY Transcription Factor Family AT4G18170 42.985 2.13e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2995g00014 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2995g00014 - - aprc:113847247 480.715