Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2995g00013 ATGTCATCCAACAGTTCTTTGAATGTGGAATTGTCAAAGAAGACGTCATTTTTTGGTTTGAAAAGATGGGTTTTGATTGGGATAGGTGTTGGTGCATTTATAGTGCTGATTCTTTGTATATTATCTGTATGGGTGATGTTTCGGAGAAAGTCTAGGTCTAGGAGATCTCTAGAGAAGTACTCTCTATCCCAAATACCAAATGTCTCAAAAGATATCGATGTTGACAAGGTTGGGGTGCAGAGTTCTCATGATCAACCAGAAAATGTGTTTATTCCAGTTCATGACAATGCGAATGATAAGAATTCTGATAAGGTATCAGTTCATTTGGGGATGAGCAAATCCAGTGATCCTGATAACGTCAGTCAGTGCAGCTCAATTTATCATCACGAGAGAGGATTTAGTTCGCTTTCAGGGGAAGAAGGAAGCTCTGGGCATGTTAGAAAGCAGTCTACATTGTCTTATGGAGGGTTGGTGACTGCCTCGCCATTAATTGGCTTGCCGGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGAGATCTGGAACAAGCAACTAATCGTTTCTCAGCTGAGAACATTCTTGGTGAGGGTGGATATGGGGTTGTTTATAGGGGCAGACTGATAAATGGAACCGAGGTGGCAGTGAAGAAACTTCTTAACAACTTGGGACAAGCAGAGAAAGAATTCAGAGTTGAAGTGGAGGCTATTGGCCATGTTAGACATAAGCATCTTGTGCGCCTGCTTGGATATTGTGTAGAAGGAGTTCACAGGCTGCTGGTGTATGAATATGTGAACAATGGTAACTTAGAACAGTGGTTACATGGGGGCATGCAACATGGCACACTTACCTGGGAGGCCCGCATTAAAGTTATACTTGGCACAGCCAAAGCGCTTTCTTACTTACATGAAGCAATAGAACCAAAAGTTATTCACCGGGATATAAAGTCTAGCAACATATTGATTGATGATGAGTTCAATGCAAAGGTTTCTGATTTTGGTTTGGCCAAACTTTTGGATTCAGGAGAAAGTCACATAACCACTAGAGTAATGGGAACGTTTGGTTATGTGGCACCAGAATATGCTAACAGTGGTTTATTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCCTACTGGAAGCAGTTACAGGAAGGGACCCTGTAGACTATGTGCGTCCCGCTAATGAGGTTAATCTTGTTGAATGGCTCAAGATAATGGTGGGGACAAGGAGGGCTGAGGAAGTTGTGGACTCAAGCCTTGAAGTTAAACCATCAATACGTGCTTTAAAACGTGCTCTTCTGGTTGCACTTAGGTGTGTTGATCCTGATGCGGACAAGAGGCCCAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCTGATGAATATCCATTTCGAGAGGATCGAAGGAATAGAAAGAGCAGCACTGTTAGCATGGGAATTGAAACAGTGAAGGATATTTCTGGTCCATCTGATGCTACTGAAAAGGTGGATCATTCTTAA 1509 0.4248 MSSNSSLNVELSKKTSFFGLKRWVLIGIGVGAFIVLILCILSVWVMFRRKSRSRRSLEKYSLSQIPNVSKDIDVDKVGVQSSHDQPENVFIPVHDNANDKNSDKVSVHLGMSKSSDPDNVSQCSSIYHHERGFSSLSGEEGSSGHVRKQSTLSYGGLVTASPLIGLPEFSHLGWGHWFTLRDLEQATNRFSAENILGEGGYGVVYRGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGGMQHGTLTWEARIKVILGTAKALSYLHEAIEPKVIHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYVRPANEVNLVEWLKIMVGTRRAEEVVDSSLEVKPSIRALKRALLVALRCVDPDADKRPKMSQVVRMLEADEYPFREDRRNRKSSTVSMGIETVKDISGPSDATEKVDHS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2995g00013 502 SUPERFAMILY Protein kinase-like (PK-like) 174 462 IPR011009 -
Gabi2995g00013 502 SMART serkin_6 190 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2995g00013 502 Gene3D Phosphorylase Kinase; domain 1 172 265 - -
Gabi2995g00013 502 FunFam Putative receptor-like protein kinase 172 265 - -
Gabi2995g00013 502 ProSitePatterns Protein kinases ATP-binding region signature. 196 219 IPR017441 GO:0005524
Gabi2995g00013 502 ProSiteProfiles Protein kinase domain profile. 190 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2995g00013 502 PANTHER OS01G0323000 PROTEIN 1 478 - -
Gabi2995g00013 502 Coils Coil 210 230 - -
Gabi2995g00013 502 Pfam Protein kinase domain 192 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2995g00013 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Gabi2995g00013 502 CDD STKc_IRAK 196 461 - -
Gabi2995g00013 502 Gene3D Transferase(Phosphotransferase) domain 1 266 478 - -
Gabi2995g00013 502 FunFam Putative receptor-like serine/threonine-protein kinase 266 475 - -
Gabi2995g00013 502 MobiDBLite consensus disorder prediction 469 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2995g00013 Gabi-Chr2995 90781 95006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2995g00013 5 463 Trihelix Transcription Factor Family AT1G70460 40.000 5.44e-96 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gabi2995g00013 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2995g00013 - - gmx:100778444 882.863