Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi298g00002 ATGAAAATGGGAAGCAAGAGTTACTTGAAGGTTTTGATTCTTTGTCTTGTAGCATTAATTGGATCAAGTCATGCTCAATTGCAACTTGGTTTCTATACTAAAAGTTGTCCAAAGGCAGAACAAATCATTTTGAAGTATGTTCTTGAGCATATCCCGGATGTCCCATCAATGGCATCTGCCCTCATAAGAATGCATTTCCATGATTGTTTTGTCAGGGGATGTGATGCATCAATTCTTCTGAACTCAACAAAAACCAATACAGCTGAAAAGAACTCTTTTCCAAATCTTACAGTCCGAGGCTTTGAATTCATCGACCAAGTAAAGAGCCTTGTTGAAGCTGAATGCCCTGGGGTAGTCTCTTGTGCTGATATCATAGCACTGACAGCCAGAGACTCTGTTCATTCCATAGGTGGACCCTTTTGGAATGTTCCAACAGGTCGAAGAGATGGACTCATCTCTAAAGCAGCAGATGTCTTGATTAGCCTTCCTGCTCCATTTCACAACCTCACCACCCTCACAACACTCTTTGGCAATGTTGGACTTGATGTTAATGACCTGGTCTTGCTCTCTGGTGCTCACACAATTGGTGTTGCCCATTGCTCAACAATTGCAACCCGGCTATATAATTTTACTGGTAAGGGTGATACAGATCCAACTCTAGACAGCGAATATGCAAAAAATCTCAAGACCTTTAAGTGCAAGAACATCAATGATCAAACCACACTTATTGAGATGGACCCTGGAAGTCGCAACACATTTGATCTTGGTTACTATACTCAAGTGGTTAAGAGAAGGGGCCTCTTCCAATCAGATTCTGCATTGCTAACTAGCTCTATTACAAGGTCTATTATCACCCAACAGCTTCAGTCAACTCAAACATTCTTTCTTGAATTTGCCAAATCCATGGAGAAAATGGGACGAATTAATGTCAAGACTGGGACACAAGGAGAGATCAGGAAGCATTGTGCACTTCTAAATAACTAA 984 0.4116 MKMGSKSYLKVLILCLVALIGSSHAQLQLGFYTKSCPKAEQIILKYVLEHIPDVPSMASALIRMHFHDCFVRGCDASILLNSTKTNTAEKNSFPNLTVRGFEFIDQVKSLVEAECPGVVSCADIIALTARDSVHSIGGPFWNVPTGRRDGLISKAADVLISLPAPFHNLTTLTTLFGNVGLDVNDLVLLSGAHTIGVAHCSTIATRLYNFTGKGDTDPTLDSEYAKNLKTFKCKNINDQTTLIEMDPGSRNTFDLGYYTQVVKRRGLFQSDSALLTSSITRSIITQQLQSTQTFFLEFAKSMEKMGRINVKTGTQGEIRKHCALLNN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi298g00002 327 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PANTHER PEROXIDASE 25-RELATED 15 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 Gene3D Peroxidase, domain 2 163 305 - -
Gabi298g00002 327 FunFam Peroxidase 30 180 - -
Gabi298g00002 327 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Gabi298g00002 327 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Gabi298g00002 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Gabi298g00002 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 FunFam Peroxidase 163 305 - -
Gabi298g00002 327 Pfam Peroxidase 53 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi298g00002 327 Gene3D - 30 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi298g00002 Gabi-Chr298 56817 58362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi298g00002 16 326 Peroxidase AT1G05260 63.462 2.56e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi298g00002 K00430 - gmx:100785662 524.242