Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2989g00002 ATGGCGTTTGATCAAAATTCCGTTCCCAACGATATGCGGCCACTGAACTCGACCCGAAATCTAGCTGAAGAGCCAGTCGTTTTGCCGCCTGTGAGTACAACGGTTCGGGAGCATGGAACCCCTGGCGCTATGCCCCTTTTCTACCCTGCTTCTGTCTCTGATGCTGGTTTGGTTGGAATGGGGTATGGAAATGTGGCTTCGGGTGCTGCTGCTGCTGCTGCTACAACCAGGTGCGTTCGCCCTGCTGTGCCGATTCCCCATCCCACCGTGAACCCTGCTATTGGGTTTAGTCATGCTTCTAATATTCCCAATGCTGTTGATCTTTCGGGTAGCTTTGTGGCAGCTGCAAATGGATATCCTATGAATTCGGGAAATTGGGTTGGGGGTAATGGGTTGGATAATGCCCTTCAGGGAAACAGCAGGGTCATTGGCAATGCCAGTGATCATGTTGGTGGTGTTGGGTTAACTGGGATTGGTTTGAGTCCTACTACAAGTCAGCGGGCTGATCAGGTGTGTGATGCCGGCGGGGATGATTCCTTGTCGGGGCGAAAATTGAAGTTTATGTGCAGTTATGGTGGGAAGATTATGCCTAGGCCAAGTGACGGAATGTTGAGATATGTTGGAGGGGAGACGAGGATCATAAGTGTTAGGAAAGATGTGAGGTTTAATGATTTGGTGCAAAAGATGGCTGATACTTTTGGGCAACCTGTGGTTATCAAGTATCAGCTCCCTGATGAGGATCTTGACGCACTGGTCTCGGTTTCCTGCCCCGATGATCTGGAGAATATGATGGAGGAGTATGAAAGATTAACTGAGAGATCTCCTGATTGTTCTGCTAAATTGAGGGTCTTTCTGTTTTCAGCTTCAGAACCTGATCCTTCTTATGTGGCACCCTTTGTGGATTTACAAAGTAGTAGGCAAAAATATGTTGAAGCGGTGAATGGAATTACTGATGGTATTAGTGGTAAACTCATAAGGAAAGAGAGTATTACAAGTGCAGCTTCTACCCAAAATTCTGATTTGAGTGGAATAGAGGTTCTTGATAGCTCAAATGCTGCTCAAGGGGATGTCAACGGGGCACCTTCTTCTGCCTCTTTATCAACTGAAGCGAATGTGGCTGCTTCTCATGATGCTACTGCAAATTTTGCAGTTTCTGAGCAGCCCAGTGCATCAATTTACTCAGATGCTTCTGCGGTTTCAGTGGGCATGCCTGTGACTAATTCTGGTCCAACTCAGACTCCACCTTTCCAGAATGAGGTTGAGTTAGAAAAGTCTGAACCTATGACTTTGTCCCAGCAGCAATTTGGGAAGCAGCAATCTGGAATTGAAATTACATCACCTGCACCTTATTTGCAGCCTTTTGTTGATCCTCGCCAGGAAGTTATGAAACATGCAGATTATGTCCAGATGCATACACATATGGGATTTCCCAATCCTCAGCTTTTAGGTAAGCCTGGGTCTATCTACTCCCGACATCAGTTTCATGATAATACTCCTTGCTTAGTGTCCCATCAGGTAATGCCTGCAATACAAATGACAGTGACTCAGCCATCTTCTCATGCTGGTGGAAGAGCGAGTGTTATTCAACCACAACCATTCATGCTGCCACAGCAAAACCGTTTGGACCAATATATTGATGAAAATACTTCAGGGCTAAGGATTCACCAGCTTCCTACTGAACAAAGTTACAATGCATATCCGGTTCAAGTCCCTTCTGTTGTAGTTGGAGGTAATTATGGCTGGGTTCAGGCTCCTCCACCAGAGAATGTTAGTTTCCCTGATGCATTATTACCTCAACAACCAGTAATGATCCCTAAGAAAGTCCAGAGAGTGGAGGACTGTTATATGTGTCGGAAAAAACTGCCTCATGTACATTCAGATCCAGTGGTTCAGGATCAGCCTAATAGTTGTGCTGGTCCATATACTGATTCAATTCCAAGTTACCATAGTCTCCCTATGGAGGAAAATTTTAGAGCTCAAGCAACAAATAGGGTTTTGGTGACTGCACCAATGAAGGACGGCAATGTTGAACAAGCAGTTGGGACCAGACCCAGGGTCTTTAGTAAATTGGAACCTCCGGGTGGATTACCATGTACTGACACAACTGGATTTTCTCTGGAGCCTGAAGGTGAGAGAATTTTTACACAAAAGCTTGACGATTCGGTTGATCCCAGGAAAGCAGTTATCCAAGAAGCAGTTGGAAGAACAGTTGAGAAACAGCGACCGAGTGATGGGTTGACGGGAACAGCACCACTGTCTTATCTAGATGATGTCGTCTGCCAGCATATTGTGCCAGTTGAAAACTGGGCTAAAGAGGATGTGCTTGTGAATAAACCTGTTAATGATGATATACCTTTGGTTGGTAGCACATCTATTGAAACTTCTGAGTGTATGGTTCAAGAATCTCCAAATGAACTTGTTAGCACTATTTCAAAAGCAGATGCTGTGGAGAATTGGATTGCACAGGACCATCTCAAACCTATTGATGGAAGGATGGACACCCTCAAGATAGGCAATCCTGAATTTTATGTAAATAATGATAAATTTGATTGCAACACTCAGCATGCTGTAGAAAAAAAAGGGATGATTCTGGATAACAACTTTGGCAGGTCAAAATTGATTGCTGATGCAAATCAAAATAAGATGATGGATGTGCTTCCCAGTTCTACTATGGAAATTTCATATGGGAATAATTCCAGGCCAGTGGAATATAATGAGGTTGTCCAACCCCCTGTTTGGGGGGGCATTCTTGGATCAAATCCTCAATCAAAGAGTGGAAACCATCTCATGGATGATGCAGTTTTGTCTTCAATTTCACCATCTGTCAGGTTTGCAGATGTGCAAGATTCTTCAAACTCACTTTTTAGCAATCAGGATCCCTGGAATATACATGGCACTTACTTTCCACCACCTAGACCTAACAAAGTGGCATTGAAGAAAGAAACCTATTCTTATAAAGATCAGTTTGGTGAGAATCCAGGCAACAACAGGGAACAAAATTTAGAAGCTCAATTGGACGATGGCCTCTACCAGACATTCAAACAGAATTTAACTTTAGATGAAGCTCAATCTGTCAAGGGCTTATCAGAAGACCGACAACTTCAAGCTGTTGCTGAAGGTTTAGCTGCTTCTGTTCTGGACTCAAGCACTTCTTCGAATCCTGAATTGCATGCCAGAGATGTGTCCCATCGTGAAGACATTGACGATGGAGATATTCAAAATGATATAACAAATATACAGTGTGTTGATAAAACTCAGGATGTTAAAAGCAAGCTCCCAGAGAAGGCAAATTTTGGCTTTCCAGTTTCAAATGTTGGAGCGTTGCAGGTTATAAAGAATTGTGACCTTGAAGAGCTGAAAGAATTGGGTTCTGGGACCTTTGGGACTGTATATCATGGAAAATGGAGGGGTACTGATGTTGCAATAAAGCGGATTAATGATAGGTGTTTTGCTGGAAAGCCTTCAGAGCAAGAACGCTTGAGAGCTGATTTTTGGAATGAGGCAATTAATCTTGCTGACTTGCATCATCCAAATGTGGTAGCTTTCTATGGTGTTGTACTTGATGGCCCTGGAGGTTCTGTGGCTACAGTAACAGAGTATATGGTTAATGGTTCTCTACGAATTGCCTTGCAGAAGAATGGGAGGAACCTTGACAAGCGCAAGCGTCTTTTGATTGCAATGGATGTGGCTTTTGGTATGGAGTATCTGCATGGAAAAAACATAGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTTCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTGTCCAAAGTGAAATGCCAGACTCTAATATCTGGTGGTGTGAGAGGAACTCTACCTTGGATGGCCCCAGAATTGCTGAACGGGAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTTTCATTTGGTATTGTCATGTGGGAACTCCTCACTGGGGAAGAGCCATATACTGATTTGCATTATGGTGCCATCATAGGTGGTATTGTGAACAACACTTTGCGGCCTCCAGTTCCAGAAACTTGTGATCCAGAGTGGAGATTGCTGATGGAGAGGTGCTGGTCATCAGAGCCATCAGAAAGACCAACCTTCACTGAGATTGCCAATGAATTACGTTCCATGTCGGCCAAGATCTCTCCCAAAGGACAAAATCAACAGCAGCAACCTACATCATCAGAGAGCCAAGTTCAGAAATGA 4221 0.4402 MAFDQNSVPNDMRPLNSTRNLAEEPVVLPPVSTTVREHGTPGAMPLFYPASVSDAGLVGMGYGNVASGAAAAAATTRCVRPAVPIPHPTVNPAIGFSHASNIPNAVDLSGSFVAAANGYPMNSGNWVGGNGLDNALQGNSRVIGNASDHVGGVGLTGIGLSPTTSQRADQVCDAGGDDSLSGRKLKFMCSYGGKIMPRPSDGMLRYVGGETRIISVRKDVRFNDLVQKMADTFGQPVVIKYQLPDEDLDALVSVSCPDDLENMMEEYERLTERSPDCSAKLRVFLFSASEPDPSYVAPFVDLQSSRQKYVEAVNGITDGISGKLIRKESITSAASTQNSDLSGIEVLDSSNAAQGDVNGAPSSASLSTEANVAASHDATANFAVSEQPSASIYSDASAVSVGMPVTNSGPTQTPPFQNEVELEKSEPMTLSQQQFGKQQSGIEITSPAPYLQPFVDPRQEVMKHADYVQMHTHMGFPNPQLLGKPGSIYSRHQFHDNTPCLVSHQVMPAIQMTVTQPSSHAGGRASVIQPQPFMLPQQNRLDQYIDENTSGLRIHQLPTEQSYNAYPVQVPSVVVGGNYGWVQAPPPENVSFPDALLPQQPVMIPKKVQRVEDCYMCRKKLPHVHSDPVVQDQPNSCAGPYTDSIPSYHSLPMEENFRAQATNRVLVTAPMKDGNVEQAVGTRPRVFSKLEPPGGLPCTDTTGFSLEPEGERIFTQKLDDSVDPRKAVIQEAVGRTVEKQRPSDGLTGTAPLSYLDDVVCQHIVPVENWAKEDVLVNKPVNDDIPLVGSTSIETSECMVQESPNELVSTISKADAVENWIAQDHLKPIDGRMDTLKIGNPEFYVNNDKFDCNTQHAVEKKGMILDNNFGRSKLIADANQNKMMDVLPSSTMEISYGNNSRPVEYNEVVQPPVWGGILGSNPQSKSGNHLMDDAVLSSISPSVRFADVQDSSNSLFSNQDPWNIHGTYFPPPRPNKVALKKETYSYKDQFGENPGNNREQNLEAQLDDGLYQTFKQNLTLDEAQSVKGLSEDRQLQAVAEGLAASVLDSSTSSNPELHARDVSHREDIDDGDIQNDITNIQCVDKTQDVKSKLPEKANFGFPVSNVGALQVIKNCDLEELKELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERLRADFWNEAINLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRIALQKNGRNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYTDLHYGAIIGGIVNNTLRPPVPETCDPEWRLLMERCWSSEPSERPTFTEIANELRSMSAKISPKGQNQQQQPTSSESQVQK 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2989g00002 1406 Gene3D - 205 288 - -
Gabi2989g00002 1406 PANTHER SERINE-THREONINE PROTEIN KINASE 251 1381 - -
Gabi2989g00002 1406 CDD PB1_UP2 188 286 - -
Gabi2989g00002 1406 PRINTS Tyrosine kinase catalytic domain signature 1235 1253 IPR001245 GO:0004672|GO:0006468
Gabi2989g00002 1406 PRINTS Tyrosine kinase catalytic domain signature 1350 1372 IPR001245 GO:0004672|GO:0006468
Gabi2989g00002 1406 PRINTS Tyrosine kinase catalytic domain signature 1198 1211 IPR001245 GO:0004672|GO:0006468
Gabi2989g00002 1406 PRINTS Tyrosine kinase catalytic domain signature 1306 1328 IPR001245 GO:0004672|GO:0006468
Gabi2989g00002 1406 SUPERFAMILY CAD & PB1 domains 200 291 - -
Gabi2989g00002 1406 Gene3D Transferase(Phosphotransferase) domain 1 1204 1406 - -
Gabi2989g00002 1406 CDD STKc_MAP3K-like 1122 1379 - -
Gabi2989g00002 1406 SUPERFAMILY Protein kinase-like (PK-like) 1108 1378 IPR011009 -
Gabi2989g00002 1406 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1204 1395 - -
Gabi2989g00002 1406 Pfam PB1 domain 204 287 IPR000270 GO:0005515
Gabi2989g00002 1406 Gene3D Phosphorylase Kinase; domain 1 1109 1203 - -
Gabi2989g00002 1406 SMART serkin_6 1116 1382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2989g00002 1406 Pfam Protein tyrosine and serine/threonine kinase 1117 1379 IPR001245 GO:0004672|GO:0006468
Gabi2989g00002 1406 MobiDBLite consensus disorder prediction 1379 1406 - -
Gabi2989g00002 1406 ProSitePatterns Protein kinases ATP-binding region signature. 1122 1153 IPR017441 GO:0005524
Gabi2989g00002 1406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1241 1253 IPR008271 GO:0004672|GO:0006468
Gabi2989g00002 1406 ProSiteProfiles Protein kinase domain profile. 1116 1386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2989g00002 1406 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1109 1203 - -
Gabi2989g00002 1406 SMART PB1_new 199 288 IPR000270 GO:0005515
Gabi2989g00002 1406 ProSiteProfiles PB1 domain profile. 184 288 IPR000270 GO:0005515
Gabi2989g00002 1406 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 204 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2989g00002 Gabi-Chr2989 12133 33408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2989g00002 184 632 MAP Kinase Kinase Kinase AT3G46920 40.088 7.63e-80 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gabi2989g00002 PK_Tyr_Ser-Thr 9.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2989g00002 - - gmx:100776264 2048.48