Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2988g00001 TCTTTCATAACACAAGATTCTGGTGATCGGGACCTTCTGGTGAAACACCTGCGGCTCTTTGACGTACCAGTTTTGAATTATACTGGCAATGATGGCCAGCGAAGTGAGCCTTTTGAAATTTCTGAAGATATGTGTGCTCTTGGCATCTATTCCCGGCTAGATCAAATTTTTGATGCTCCTGTTGCTGTGAAGGAGGTTTTGATTGGCCAGTTTAATCTAGATCATTCATATGTTGGATCCAAAGAAACTGATAAGAATGCTGATGATGCCCCCAAATTGGGAATTATAGATTTATGGACACCAGAAAATCACTACCATTGGTCCAAGTCTAGGTATGGGAATCATGTCTCAGCAGTTGTTGCACAAGTGGAAAGCTCGCAGCTTCTATTGAATAATTTGAATCTGGGAGAAATTGAGAAGCTGAGTTCCCAGGAAAGGAAGCTTCAAGATTTGATTGCTACCTTGGAGGAAAGTGTTAAAACGTTTCAGGATGAGGAAAGAAGCTTAGTGAATCAAGCAGCTAATCTTCGTAAACAGTGGGAGGGCATTAGTATTACAGCCCAGAATGAGAATAGAAAACGTCAAGCAATCATTAGCCGAATTGATCAAAGGAAAGGGATACTAAAATCGATGGAGGAGCAGGATGATATTGATACGGAGATAGCAAAGCTGGCTGATCAGGCTACAAAATATAACATTCAGCGATTCCATAATGCAATGAAAATTAAGGATCTTCTTGTTGATGCTGTGGGATATCGAAGGAGTTTTGTTGAACAACGTATGGCTTTCATTGAATTTGATGCAAAGATTGGAGAATTGGAGGCCAATGTGAAACAGCATGAGAATTTTGCTGTGCAAGCATCATTGCAGTTTGATATCTGTAAGAAAGAGGCTGAAAATTGTAGACAGAAGCTTACAGATACCTTGAAGTATGCTAAATCAATTGCTCGGCTTACACCTCAACTAGAGAAGGAATTTCTTGAGATGCCTACTACAATTGAGGAATTGGAAGCAGCTATCCAAGATACCGCTTCTCAAGCCAATTCAATCCTGTTTGTCAATCATGACATATTGGAACAATATATGAATCGTCAACGACAGATAGAAGATCTTGCAGCAAAACTTGAAGCAGACAAGGAGGAATCTATAAGGTGTTCAGCTCAAATAGATAACATTAAGGGAAAATGGCTTCCATCACTGAGAAACCTTGTGTCGCAGATAAATGAAACCTTCACCCGTAATTTTAGTGAGATGGCTGTTGCGGGAGAAGTTTCACTAGATGAGCATGGCATGGACTTCGATCAATTTGGAATATTTATAAAAGTCAAATTCAGGGAAAACGGAAAGCTTCAAGTTCTCAGTGCCCATCATCAATCTGGCGGGGAACGATCAGTTTCAACTATTGTTTATCTTGTATCCCTTCAAGATCTTACAAATTGCCCATTTAGAGTTGTAGATGAGATCAACCAAGGCATGGACCCAATAAATGAAAGGAAGATGTTCCAGCAACTAGTGAGAGCAGCAAGCAAGCCAAATACGCCACAGTGTTTCTTGCTTACACCGAAGTTGTTACCAGATCTGCAGTATAGTGAGGCATGCAGTATCTTGAATGTAATGAATGGCCCTTGGATTGAGCAACCCTCAAAGGTCTGGACTACTGGTGATCGATGGGGTATTATCACGGGACGTGTTGGAGAGACCCAATGTTAA 1710 0.4076 SFITQDSGDRDLLVKHLRLFDVPVLNYTGNDGQRSEPFEISEDMCALGIYSRLDQIFDAPVAVKEVLIGQFNLDHSYVGSKETDKNADDAPKLGIIDLWTPENHYHWSKSRYGNHVSAVVAQVESSQLLLNNLNLGEIEKLSSQERKLQDLIATLEESVKTFQDEERSLVNQAANLRKQWEGISITAQNENRKRQAIISRIDQRKGILKSMEEQDDIDTEIAKLADQATKYNIQRFHNAMKIKDLLVDAVGYRRSFVEQRMAFIEFDAKIGELEANVKQHENFAVQASLQFDICKKEAENCRQKLTDTLKYAKSIARLTPQLEKEFLEMPTTIEELEAAIQDTASQANSILFVNHDILEQYMNRQRQIEDLAAKLEADKEESIRCSAQIDNIKGKWLPSLRNLVSQINETFTRNFSEMAVAGEVSLDEHGMDFDQFGIFIKVKFRENGKLQVLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWTTGDRWGIITGRVGETQC 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2988g00001 569 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 289 520 IPR027417 -
Gabi2988g00001 569 Gene3D - 364 538 IPR027417 -
Gabi2988g00001 569 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 564 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Gabi2988g00001 569 Coils Coil 138 179 - -
Gabi2988g00001 569 Coils Coil 358 381 - -
Gabi2988g00001 569 FunFam Structural maintenance of chromosomes 5 365 536 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2988g00001 1 569 Structural Maintenance of Chromosomes family AT5G15920 61.579 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2988g00001 K22803 - gmx:100778678 940.258