Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2987g00039 ATGGCAAGAAGATGGTCCTTTTACAAGGATTTGCTTCCTGTGGTTGTGATTATAGGCAACGAATGCAATGACATGGGTTTACTCACTCTTTTCAAAGCAGCTACCTTGCAAGGGATGAACAACCATGTCTTTGTTGCTTATGCTTATGCTGTTGCTACTATCATACTCCTTCCTGTTACTATTTTCCATCGAAGGTCAAGAGTGGCTCCTCCACTCAGTTTCTCCATAATATCCAAAATTGTTCTTCTTGGGGTGATAGGAAGTTCAGCTCAGATGCTAGCATATGCTGGCACTAGTTACAGTTCTCCAACACTTGCTTCATCAATTGGTAATCTGGTACCTGCTTTCACCTTTATACTTGCCGTCACTTTCAGGATGGAAAAAATAGCTGCAAAAAGTAGAAGTAGTCAAGCTAAGGTAATGGGAAGCATAATATCAATAGCAGGTGCATTTGTACTGACTTTCTATAAGGGCCCATCAATCATCAATGGTCATTACCATCTTCCCTCACCACTTCAACAACAACTAATTAACATTCTTAATTCTGAGGATGCAAGTTGGGTCATTGCTGGCATTCTGCTGATAGCTGCATATGTACTGACTTCACTATGGTACATTGTACAGGTGGAAGTCTTGAAAGTGTTCCCGGATGAACTAACTACGGTCTTCTTGTATGACGTGACTGCCACCATCACAACAACAATTGTTTGTTTATTCACAGCGCCAAATACAAGTGCTTGGAAAATTGGACTAAATATTTCACTGATCTCTATTGTCTGCTCTGGAATATTTGGAAAGTTAGTCAGCAATGTAGTTTACACCTGGGCAGTGCACTTAAAGGGGCCTGTCTTTGTTTCATCATTCAAGCCACTCCAAATTGTTATTGCTGTTGCCATGGGAGTTATGTTCCTTGGTGATACTCTTCACTTTGGAAGTATAGTTGGAGCCACAATAATATCATTTGGCCTTTATGCTGTATTGTGGGGCAAAGCAACAGAAGAGATTGAGGAAGATGTTGGTAGCCTTGAATCACCAACTACTGAGAATGTTCCTCTCTTGCAAAGCTACATAACTAAAACTTCTGACAAGAATCCAGATAGAAACTATTGTAAGACAAGCAAACCATAA 1128 0.4034 MARRWSFYKDLLPVVVIIGNECNDMGLLTLFKAATLQGMNNHVFVAYAYAVATIILLPVTIFHRRSRVAPPLSFSIISKIVLLGVIGSSAQMLAYAGTSYSSPTLASSIGNLVPAFTFILAVTFRMEKIAAKSRSSQAKVMGSIISIAGAFVLTFYKGPSIINGHYHLPSPLQQQLINILNSEDASWVIAGILLIAAYVLTSLWYIVQVEVLKVFPDELTTVFLYDVTATITTTIVCLFTAPNTSAWKIGLNISLISIVCSGIFGKLVSNVVYTWAVHLKGPVFVSSFKPLQIVIAVAMGVMFLGDTLHFGSIVGATIISFGLYAVLWGKATEEIEEDVGSLESPTTENVPLLQSYITKTSDKNPDRNYCKTSKP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2987g00039 375 PANTHER WAT1-RELATED PROTEIN 12 341 IPR030184 GO:0016020|GO:0022857
Gabi2987g00039 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 330 - -
Gabi2987g00039 375 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020
Gabi2987g00039 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2987g00039 Gabi-Chr2987 371890 375465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2987g00039 1 356 Nodulin-like Gene Family AT3G28050 47.154 4.96e-113 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2987g00039 - - gmx:100790743 564.303