Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2987g00037 ATGGCAAGAAGATGGTCCTTTTACAAGGATTTGCTTCCTGTGGTTGTGATTATAGGCAACGAATGCAATGACATGGGTTTACTCACTCTTTTCAAAGCAGCCACCTTGCAAGGGATGAACTACCATGTCTTTGTTGCTTATGCTTATGCTGTTGCTACTATCATACTCCTTCCTGTTACTATTTTCCATCGAAGGTCAAGAGTGGCTCCTCCACTCAGTTTCTCCATAATATCCAAAATTGTTCTTCTTGGGGTGATAGGAAGTTCAGCTCAGATGCTAGTATATGCTGGCACTAGTTACAGTTCTCCAACACTTGCTTCATCAATTTGTAATCTGTTACCTGCTTTCACCTTTATACTTGCCGTCACTTTCAGGATGGAAAAAATAGCTGCAAAAAGTAGAAGTACTCAAGCTAAGGTAATGGGAAGCATAATATCAATAGCAGGTGCATTTGTATTGACTTTGTATAAGGGCCCATCAATCATCAATGGTCATTACCATCTTCCCTTACCACTTCAACAACAACCGATTAACATTCTTAATTCTGAGGATGCAAGTTGGGTCATTGCTGGCATTCTGCTGATAGCTGGATATGTACTGACTTCACTCTGGTGCATTGTACAGGTGGAAGTCTTGAAAGTGTTCCCGGATGAAATAACTACGGTCTTCTTGTATGACGTGACTGCCACCATCACAACAACAATTGTATGTTTATTCTCAGTGCCAAATACAAGTGCTTGGAAAATAGGACTAAATATTTCACTGATCTCTATTGTCTCCTCTGGAATATTTGGAAAGTTAATGAGCAATGTAGTTTACACCTGGGCAGTGCACTTAAAGGGGCCTGTCTATGTTATATCATTCAAGCCACTCCAAATTGTTATTGCTGTTGCCATGGGAGTTATGTTCCTTGGTGATACTCTTCACTTTGGAAGTATAGTTGGAGCTACAATAATATCATTTGGCCTTTATGCTGTATTGTGGGGCAAAGCAACAGAAGAGATTGAGGAAGATGTTGGTAGCCTTGAATCACCAACTACTGAGAATGTTCCTCTCTTGCATAGCTACAGAACTAAAACTTCTGACAAGAATCCAGTTAGAAACTATTGTAAGACAAGCAAACCATAA 1128 0.3998 MARRWSFYKDLLPVVVIIGNECNDMGLLTLFKAATLQGMNYHVFVAYAYAVATIILLPVTIFHRRSRVAPPLSFSIISKIVLLGVIGSSAQMLVYAGTSYSSPTLASSICNLLPAFTFILAVTFRMEKIAAKSRSTQAKVMGSIISIAGAFVLTLYKGPSIINGHYHLPLPLQQQPINILNSEDASWVIAGILLIAGYVLTSLWCIVQVEVLKVFPDEITTVFLYDVTATITTTIVCLFSVPNTSAWKIGLNISLISIVSSGIFGKLMSNVVYTWAVHLKGPVYVISFKPLQIVIAVAMGVMFLGDTLHFGSIVGATIISFGLYAVLWGKATEEIEEDVGSLESPTTENVPLLHSYRTKTSDKNPVRNYCKTSKP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2987g00037 375 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020
Gabi2987g00037 375 PANTHER WAT1-RELATED PROTEIN 12 341 IPR030184 GO:0016020|GO:0022857
Gabi2987g00037 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Gabi2987g00037 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2987g00037 Gabi-Chr2987 365476 368781 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2987g00037 5 345 Nodulin-like Gene Family AT5G40240 47.262 2.85e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2987g00037 - - gmx:100790743 550.051