Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2987g00032 ATGGCAATGCAAGAATCATTGTTGCGCTCTTCTTCCTTTAGCTATGGATTCAAATACGATGTGTTTCTCAGCTTTAGAGGCGAAGATACTCGTCACGGTTTCACAGGCCATCTCTACAAAGCTCTTCTTGACAGAGGAATCCACACCTTCATTGATGATAAAGAGCTTCAAAGAGGAGAGGAAATCACACCATCACTTGTCAAGGCAATTGAAGAATCCAGGATTTCCATCATTGTGTTCTCCAAGAACTATGCTTCTTCTTCATTTTGCTTGGACGAACTTGTCCATATCCTTCACTCCATCAAGGAAAATGGTCGGTTGGTTTTGCCAGTTTTCTATGACGTTGACCCTTCTGATGTGCGAAAGCATACAGGTACTTATGGTGTGGCATTGACTAGGCATGAGGAGAGGTTTAAGGATAACATGGAAAGGTTGCATAAATGGAAGATGGCTCTGAATCAAGCAGCTGACTTGTCTGGCTTTCATTTCAAACAACAAGGGAATGAGAATGAATATGAGTTTATTGAGAAGATTGTTAAAGTGGTCTCCAACAATATTGATCGTGCTCCTCTACAAGTTGCGAAGTATCCAGTTGGAATGGAGTCTAAAGTGAAAGAAGTAATGTCACTTCTCAATGTCCGATGTGATGGAGTCCGCATGATAGGGATCCATGGAATTGGGGGAATAGGGAAGACGACAGTTGCTCGAGCAGTTTATAATGCTATTGCTGATTCATTTAAAGCTTTGTGTTTTCTTGATAATGTGAGAGAAAATTCAATTAAACATGGATTAGAACGTCTCCAAGAGACACTTCTTTCTGATTTAGTAGGAGAGAAGGATATTAAGTTAACAAGTGTCAATAAAGGAATTTCAATAATAGAGCATAGGCTCCAAAGGAAGAAGGTTCTTTTAGTTCTTGATGATGTTGACAAATTGGAGCAATTGCAGGCAACTGTTGGAGGGCTTGATTGGTTTGGTTCTGGCAGCAGAATCATCATTACAACTAGGGATAAGCATTTGCTAAAAAGTCATGGGGTTGAGAAAACTTATGAGTTAGATGGGTTGAATAACAAAGAAGCTCTTGAATTACTTTGTTGGAGTGCTTTTAAAACTGACAGAGTTGATTCCAGTTATGTGGAAATTTTAAATCGTGCAGTAACTTATGCTTCTCGACTTCCACTGGCATTGGAGGTAATGGGTTCCTATTTGTTTGGGAAAAGGATAGAAGAATGGGAATCTGCATTAGATAAGTATGAGAGAATTCCTAATAAAGAGATCCAAAAGATACTTGAATTAAGTTTTCATTCTTTGGGGGAATATGAGCAGAAAATTTTTCTTGATATTGCTTGTTTCTTCAAAGGAAATAATTTAGCATATGTCAAAAAGTTACTTTATGCTCATCATGGTATCTGCCCAGAATATGGTCTTGGAGTGTTGATTGAAAAGTCTCTCATAAAGATTAATGTATATCGTAATGTAACATTGCATGACCTGATAGAGGACATGGGTAAAGAAATTGTCCGACAGGAAGCCCCAGAAGAGCCAGGCAAACGTAGTAGATTATGGTTCCCCAATGATATAGTTCAAGTTTTAGAAGATAACACGGGAACTAGTAGTATTCAAATACTAATGCTGGATTTCCTCAAATTTGAAGAAGTAGTTGAATGGGATGGAAACGCCTTCAAGGAGATGAAAAACCTCAAAACACTTATTATTAGAAAAGGTTGTTTTTCGGAAGGTCCCAAACATCTTCCAAATAGTTTGAGAGCACTAGAATGGTGGAGATATCCTTCACCATCTTTACCGTCTAATTTTCGTCAAAAGAACCTTGAGTTTGTGAATATGAGAGTTTTGAATTTTAATGGTTGTCATTGTATTACAGAGATACCTGATGTATCAGGTGTTCCAAGTTTGGAAGAATTATCATTTGAATGTTGTGATAATTTAATTAGAATTCACAAATCAGTTGGATTACTTAAAAAACTTAAAATCTTGAACGCTGATGGTTGCAAGAAGTTTAGGAGTTTTCCACCCATCAAGTTGACCTCTCTTGAAGAACTCCAGTTTTCATGTTGTCCTAGTCTTGAGAATTTTCCAGAAATATTAGGAAAGATGGAAAAAATAACACATCTTGAAATCCAAGACACCCCCATAAAAGAACTGCCATTTTCAATTCAAAATCTCACTCGTCTTCGAACTCTAGAGCTGTCACGTTGTGGAGTTTTCCAGTTACCAAGCAACATTTCGATGATGCGAGATTTTGATCATTTTATTTTTGAGGAATGTGAGGGGTTGCTTATATCTAAACAGGACGAAGGTGATGCACAAGTGAGCTCATTGATGTTAAAGAAAACCTTTGATATTAACCTTTCGAAATGCAATATGTCAGACGAATTCATTCGAAAAGGTCTCCCTTTGTTTTTCAATATGCGACGGTTATTCCTTTACGAGTGTAATCTTAAAAGTCTTCCTGCATGCATCAAAGAATGTCTCTTTTTGACAGAAATTCAGTTATTTTTGTGCGAGAATTTTCGGGAAATTGGAGGGATTCCACCCAACTTAGAAACATTCAAAGCATATGAGTGCACATCCTTGAAAGATTTAGACCTCACACTATTTCCTGAATGTTTGACGACACTTTTTCTTATAAATTGCGAGAATCTTCAAGAAATCAGAGGGATTTCACCCAACATAAGAACTTTGGGTGCAACAGAATGCCCATCCTTGACTTCCGAGTGTAGAAGCATGTTACTTAATGAGGAATTTCATGAGGGTGGAGACAAACTGTTTTTCTTGCCAGAAACAAGGATTCCAGAGTGGTTTGAGCACTGTAGCAATGGACCGTCAATTTCATTATGGTTTCGTAACAAGGTCCCTGCCATATCTCTATGTTTTGCTATTCGATTCAAATCATTTTATACAGATGATGGCTATTTTGAGCTCAATATTGAAGTCAACGGCATTTCAGTAGATACAAGAGTGTGTTTCAGTTGGTTTCTCCTGGAAAGGGATTATACAGTTCTTTGTGATATAAAACAGGAAAAACTTGACGGAATTTTTTCTGATATAGAAGAAAATAAATGGAATTATGTGGTGTGTACTGCATCAATTAGAGGAGAAGAAGTGTTTGTCAAACAAAGTGGAATCCATGTATTCAAACAAGGAAGTTGCATTGAGGACATTCAATTCACCGATCCACTATTGCTGAAAGAAGAGCATGAGCATAGATTGATGGACATGACAGATTCTCAGACAATTTATGCAGCACCAAACAATAATGTGAATTGGCATTCAAATTCAATGGTACCAAAGCTGGGGAGTAGCACTCCCGATTTCCAAGGATGTGAAATTGTGTCCAGAAAGAGGAAAATAGGCATGTTAAATGTGGACTTCGACAATGAAGCCTGTGAACCTTGTTGTCCTGCACCTTCAAAAGTGGTTTTGAATTCAGCAGTTTCAAACTTTGCTAGTGGTGCTGCCAGTGAAGAAGCAAAAATCATGGCAAGGCAAGAATCATTGTGCTCCTCTTCTTCCTTTAGCTATGGATGGAAATATGATGTGTTTCTCAACTTTAGAGGCGAAGATACTCGTCATGGTTTCACTGGCCATCTCTACAAAGCTCTTCATGATAGGGGAATCCACACCTTCTTTGATGTTAAAGAGCTTCAAAGAGGAGAGCAAATCACACCATCACTTGTCAAGGCAATTGAAGAATCCAGGATTGCCATCACTGTGTTCTCTGAGAACTATGCTTCTTCTTCATTTTGCTTAGAGGAACTTGTCCATATCATTCACTCCATCAAGGAAAAGGGTCGGTTGGTTTTGCCAGTTTTCTATGACGTTGACCCTTCTGATGTGCGAAAGCATACAGGTACTTATGGTGAGGCATTGACTAGGCATGAGGAGAGGTTTAAGGATAACATGGAGAGGTTGCAGAAATGGAGGATGGCTTTGTGTCAAGCAGCTGACTTGTCTGGCTTTCATTTCAAACAGAATGAGAATGAATATGAGTTTATTGAGAAGATTGTTAAAGTGGTCTCCAACAAGATTAATCGCACTCCTTTACATGTTGCGAAGTATCCAGTTGGATTGGAGTCTAAAGTGAAAGAAGTAATTTCACTTCTTAATGTTCGATCTGATGGAGTCCGCATGATAGGGATCCATGGAATTGGGGGAATAGGGAAGACGACAGTTGCTCGAGCAATTTATAATTTGATTGCCCAATCATTTGGAGCTTTGTGTTTTCTTGATAATGTGAGAGAAAATTCAATTAAACATGGATTAGAACGTCTCCAAGAGACTCTTCTTTCTGATTTAGTAGGAGAGAAGGATATTAAGTTAGCAAGTGTAGATAAAGGAATTCCAATAATAAAGCATAGGCTCAAGAGGAAGAAGGTTCTTTTAGTTCTTGATGATGTTGACAAACTGGAGCAATTGGAGGCAACTGTTGGAGGGCTTGATTGGTTTGGTTCTGGCAGTAGAATCATCATTACAACTAGGGACACGCATTTGCTGAAAATTCATGGGGTTGAGAAAACTTATGAGCTAGATGGGTTGAATAACAAAGAAGCTCTTGAATTAATTAGTTGGAATGCTTTTAAAACTGACAAAGTTGATCCCAGATATGTAGACATTTTAAACCGTGTAGTAACTTATGCTTCTCGACTTCCATTGGCTTTGGAGGTAATAGGTTCCAACTTGTATGGAAAAAGGATAGAAGAATGGGAATCTGCATTAGATCAGTACAAAAGAATTCCTAATGAAGAGATCCAGAAGATACTTAAAGTAAGTTTTGATTCTTTGGAGTATGATCAGAAACAAATGTTTCTTGATATTGCTTGTTGCTTTAAAGGATATGCTTTGTCATATGTCTATGCTCATCTTGATTTCTGCCTAGAATATGGTATTGGAGTGTTGATTGAAAAATCTCTCATAAAGATTGATGTATTTGGTCATGTGACATTGCATGACCTGATAGAGGACATGGGTAAAGAGATTGTCCGACAGGAAGCACCAAGAGAGCCTGGCAAACGTAGTAGATTATGGTTCCCGGATGATATAGTTCAAGTTTTAGAAGATAATACGGAGTTTGTGAATATGAGAGTTTTGAATTTTAGTCGTTGTCATTGTATTACAGAGATACTTGACGTGTCTGGTGTTCCAAATTTGGAAGGATTATCATTTGCAAAATGTGAAAATTTAATTAAAATTCACAAATCAGTTGGATTCCTGAATAAACTTAAAATCTTGAACGCTGATGGTTGCAAGAAGTTTAGGAGTTTTCCACCTATTGAGTTGACCTCTCTTGAAAAACTCCAGCTTTCATGTTGTCCTAGTCTTGAGAATTTTCCAGAAATATTAGGACCAATGGAAAAAATAACATATCTTGAAATCCGAGACACTCCCATAAAAGAACTGCCATTTTCAATTCGAAATCTCACTAGGCTTGGAAGACTAAGGCTGACATGTTGTGGAGTTTTTCAGTTACCAAGGAGCATTTTGATGATGCGAGATTTTCGTAATTTTAATTTTGAGGAATGTGAGGGATTGCTTATATCTAAACAGGACGAAGGTGATGCACAAGTGAGCTCATTGGTGTTAAAGAACACCTTTGATATTAACCTTTCGAAATGCATTATGTCAGATGAATTCCTTCGAAAAGGTCTCCCTTTGTTTTTAAATATGCGACGGTTATTCCTAGACGAGTGTAATCTCACAAGTCTTCCTGCATGCATCAAAGAATGTCTCTTTTTGAAAAAAATTGAGTTATTTTGGTGCGAGAATTTTAGGGAAATTGGAGGGATTCCACCCAACTTAGTAACATTCGAAGCAATTGGGTGCCGAGCCTTGAAAGATTTAGACCTCACACTATTTCCTGGATGTTTGATGACACTTATTCTGAGAAATTGCGAGAATCTTCAAGAAATCAGAGGGATTTCACCCAACATAAGAACTTTGCAAGCAACAGGCTGCCCATCCTTGACTTCCGAGTGTAGAAGCATGTTACTGAATGAGGAATTGCATGAGGAGGGTGGAGACAAAGCGTTTCTCTTGCCAAAAACAAGGATTCCTGAGTGGTTTGAGTACTGTACCAATGGACCGTCAATTTCTTTCTGGTTTCGTAACAAGGTCCCTGCGATATCTCTATTTTTTGCTATTCCATTCAAATTTCACTATTTTGGGCTCAATATGGAAGTCAACGGCATTTCAAAAGATACAGGAGTGGGTTTCAATTGGTTTCCCCTGGCAGGGGATTATACAGTTCTTTGTGATATAAAACAGGAAAAACTTGACGGAATTTTTTCTGATATAGAAGAAAATAAATGGAATCATGTGGTGTGTACTGCATCAAACAGCAGAGAAGAAGTGTTTGTCAAACAAAGTGGAATCCATGTATTCAAACAAGAATGTCGCATGGAGGACATTCAATTCACCGATCCACTGTTGCTGAAAGAAGAGCACGAGTATAAATTGGTGGACATGACAAATTCTCTGACAATTTATGCAGCACCAAACAATAATGTGAATTGGCATTCAAATTCAATGGTACCAAAGCTGGGGAGTAGCACTCCCGATTTCCTAGGATGTGAAATTGTGTCCAGAAAGAGGAAAATAGGTATGTTAAATGTGGACTTGGACAATGAAGCATGTGAACCTTCCTGTCCTGCACCTTCAAAAGTGGCTTTGAATGCAGCAGTGTCAAACTTTGCTAGTGGTGTTGCCAGTGAAGGAGAATCTTCTCAAAACCCAGGTTTTACATAG 6762 0.3814 MAMQESLLRSSSFSYGFKYDVFLSFRGEDTRHGFTGHLYKALLDRGIHTFIDDKELQRGEEITPSLVKAIEESRISIIVFSKNYASSSFCLDELVHILHSIKENGRLVLPVFYDVDPSDVRKHTGTYGVALTRHEERFKDNMERLHKWKMALNQAADLSGFHFKQQGNENEYEFIEKIVKVVSNNIDRAPLQVAKYPVGMESKVKEVMSLLNVRCDGVRMIGIHGIGGIGKTTVARAVYNAIADSFKALCFLDNVRENSIKHGLERLQETLLSDLVGEKDIKLTSVNKGISIIEHRLQRKKVLLVLDDVDKLEQLQATVGGLDWFGSGSRIIITTRDKHLLKSHGVEKTYELDGLNNKEALELLCWSAFKTDRVDSSYVEILNRAVTYASRLPLALEVMGSYLFGKRIEEWESALDKYERIPNKEIQKILELSFHSLGEYEQKIFLDIACFFKGNNLAYVKKLLYAHHGICPEYGLGVLIEKSLIKINVYRNVTLHDLIEDMGKEIVRQEAPEEPGKRSRLWFPNDIVQVLEDNTGTSSIQILMLDFLKFEEVVEWDGNAFKEMKNLKTLIIRKGCFSEGPKHLPNSLRALEWWRYPSPSLPSNFRQKNLEFVNMRVLNFNGCHCITEIPDVSGVPSLEELSFECCDNLIRIHKSVGLLKKLKILNADGCKKFRSFPPIKLTSLEELQFSCCPSLENFPEILGKMEKITHLEIQDTPIKELPFSIQNLTRLRTLELSRCGVFQLPSNISMMRDFDHFIFEECEGLLISKQDEGDAQVSSLMLKKTFDINLSKCNMSDEFIRKGLPLFFNMRRLFLYECNLKSLPACIKECLFLTEIQLFLCENFREIGGIPPNLETFKAYECTSLKDLDLTLFPECLTTLFLINCENLQEIRGISPNIRTLGATECPSLTSECRSMLLNEEFHEGGDKLFFLPETRIPEWFEHCSNGPSISLWFRNKVPAISLCFAIRFKSFYTDDGYFELNIEVNGISVDTRVCFSWFLLERDYTVLCDIKQEKLDGIFSDIEENKWNYVVCTASIRGEEVFVKQSGIHVFKQGSCIEDIQFTDPLLLKEEHEHRLMDMTDSQTIYAAPNNNVNWHSNSMVPKLGSSTPDFQGCEIVSRKRKIGMLNVDFDNEACEPCCPAPSKVVLNSAVSNFASGAASEEAKIMARQESLCSSSSFSYGWKYDVFLNFRGEDTRHGFTGHLYKALHDRGIHTFFDVKELQRGEQITPSLVKAIEESRIAITVFSENYASSSFCLEELVHIIHSIKEKGRLVLPVFYDVDPSDVRKHTGTYGEALTRHEERFKDNMERLQKWRMALCQAADLSGFHFKQNENEYEFIEKIVKVVSNKINRTPLHVAKYPVGLESKVKEVISLLNVRSDGVRMIGIHGIGGIGKTTVARAIYNLIAQSFGALCFLDNVRENSIKHGLERLQETLLSDLVGEKDIKLASVDKGIPIIKHRLKRKKVLLVLDDVDKLEQLEATVGGLDWFGSGSRIIITTRDTHLLKIHGVEKTYELDGLNNKEALELISWNAFKTDKVDPRYVDILNRVVTYASRLPLALEVIGSNLYGKRIEEWESALDQYKRIPNEEIQKILKVSFDSLEYDQKQMFLDIACCFKGYALSYVYAHLDFCLEYGIGVLIEKSLIKIDVFGHVTLHDLIEDMGKEIVRQEAPREPGKRSRLWFPDDIVQVLEDNTEFVNMRVLNFSRCHCITEILDVSGVPNLEGLSFAKCENLIKIHKSVGFLNKLKILNADGCKKFRSFPPIELTSLEKLQLSCCPSLENFPEILGPMEKITYLEIRDTPIKELPFSIRNLTRLGRLRLTCCGVFQLPRSILMMRDFRNFNFEECEGLLISKQDEGDAQVSSLVLKNTFDINLSKCIMSDEFLRKGLPLFLNMRRLFLDECNLTSLPACIKECLFLKKIELFWCENFREIGGIPPNLVTFEAIGCRALKDLDLTLFPGCLMTLILRNCENLQEIRGISPNIRTLQATGCPSLTSECRSMLLNEELHEEGGDKAFLLPKTRIPEWFEYCTNGPSISFWFRNKVPAISLFFAIPFKFHYFGLNMEVNGISKDTGVGFNWFPLAGDYTVLCDIKQEKLDGIFSDIEENKWNHVVCTASNSREEVFVKQSGIHVFKQECRMEDIQFTDPLLLKEEHEYKLVDMTNSLTIYAAPNNNVNWHSNSMVPKLGSSTPDFLGCEIVSRKRKIGMLNVDLDNEACEPSCPAPSKVALNAAVSNFASGVASEGESSQNPGFT 2253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2987g00032 2253 SUPERFAMILY L domain-like 1677 1998 - -
Gabi2987g00032 2253 FunFam Disease resistance protein (TIR-NBS-LRR class) 1181 1352 - -
Gabi2987g00032 2253 SUPERFAMILY "Winged helix" DNA-binding domain 424 532 IPR036390 -
Gabi2987g00032 2253 Gene3D - 1347 1512 IPR027417 -
Gabi2987g00032 2253 Gene3D - 184 348 IPR027417 -
Gabi2987g00032 2253 SMART till_3 18 158 IPR000157 GO:0007165
Gabi2987g00032 2253 SMART till_3 1184 1324 IPR000157 GO:0007165
Gabi2987g00032 2253 Gene3D - 1518 1602 IPR042197 -
Gabi2987g00032 2253 Gene3D - 354 438 IPR042197 -
Gabi2987g00032 2253 SMART AAA_5 217 355 IPR003593 GO:0016887
Gabi2987g00032 2253 SMART AAA_5 1381 1519 IPR003593 GO:0016887
Gabi2987g00032 2253 Gene3D - 14 183 IPR035897 -
Gabi2987g00032 2253 Gene3D Ribonuclease Inhibitor 520 772 IPR032675 -
Gabi2987g00032 2253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1346 1612 IPR027417 -
Gabi2987g00032 2253 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 161 IPR035897 -
Gabi2987g00032 2253 Gene3D Ribonuclease Inhibitor 1783 2008 IPR032675 -
Gabi2987g00032 2253 SUPERFAMILY Toll/Interleukin receptor TIR domain 1174 1327 IPR035897 -
Gabi2987g00032 2253 ProSiteProfiles TIR domain profile. 17 186 IPR000157 GO:0007165
Gabi2987g00032 2253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 448 IPR027417 -
Gabi2987g00032 2253 Gene3D Ribonuclease Inhibitor 781 922 IPR032675 -
Gabi2987g00032 2253 ProSiteProfiles TIR domain profile. 1183 1350 IPR000157 GO:0007165
Gabi2987g00032 2253 Pfam NB-ARC domain 1365 1600 IPR002182 GO:0043531
Gabi2987g00032 2253 Pfam NB-ARC domain 201 431 IPR002182 GO:0043531
Gabi2987g00032 2253 Gene3D - 1181 1346 IPR035897 -
Gabi2987g00032 2253 SUPERFAMILY L domain-like 509 913 - -
Gabi2987g00032 2253 PRINTS Disease resistance protein signature 1553 1567 - -
Gabi2987g00032 2253 PRINTS Disease resistance protein signature 1384 1399 - -
Gabi2987g00032 2253 PRINTS Disease resistance protein signature 1764 1780 - -
Gabi2987g00032 2253 PRINTS Disease resistance protein signature 1460 1474 - -
Gabi2987g00032 2253 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 747 IPR044974 GO:0006952
Gabi2987g00032 2253 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 188 - -
Gabi2987g00032 2253 Pfam TIR domain 1184 1354 IPR000157 GO:0007165
Gabi2987g00032 2253 Pfam TIR domain 18 186 IPR000157 GO:0007165
Gabi2987g00032 2253 Gene3D Ribonuclease Inhibitor 1688 1782 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2987g00032 Gabi-Chr2987 317194 331681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2987g00032 13 759 WRKY Transcription Factor Family AT4G12020 28.947 3.17e-76 280