Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2987g00031 ATGGCAAGGCAAGAATCATTGTTGCCCTCTTCTTCCTTCAGCTATGGATGGAAATACGATGTGTTTATCAGCTTTAGAGGCGAAGATACTCGTCGCGGTTTCACTGGCAATCTCTACAAAGCCCTTCATGACAAAGGAATCCACACCTTCATTGATGATAAAGAGCTTCAAAGAGGAGAGGAAATCACACCATCACTTGTCAATGCAATTGAAGAATCCAGGATTGCCATCACTGTGTTCTCTAAGAACTATGCTTCTTCGTCATTTTGCTTGGATGAACTTGTCCATATCCTTCACTCCATCAAGGAAAAGGGTCGGTTGATTTTGCCAGTTTTCTATTACGTTGACCCTTCTGACGTGCGACATCAGAGAGGTAGCTATGAAGAAGCACTTGCTACACATGAGAAGAGGTTTAAGGATGACATGGAGAAGGTGCGGAAATGGAGGATGGCTCTGCGTCAAGTAGCTCACTTGTCTGGCTTTCATTTCAAACAAGAAGGGTACTGTTTTTATCTTCCTATGAATGAGAATGAATATGAGTTTATTCAGAAGATTATTAAAGAGGTCTCCAACAAGATTAATCGCACTCCTTTACATGTTGAGAAGTATCGAGTTGGATTGGAGTCTAAAGTGAAAGAAGTAATCTCACTTCTCAATGTCCGATCTGATGGAGTCCGTATGATCGGGATCCATGGCATTGGGGGAATTGGGAAGACAACAGTTGCTCGAGCAGTTTATAATGTTATTGCTGATTCATTTGAAGCTTTGTGTTTTCTTGATAATATGAGAGAAAATTCAATTAAACATGGATTCGAACATCTCCAGGAGACCCTTCTTTCTGATTTAGTCGGAGAGAAGGACATCAAGTTATCAAGTGTCAATAAAGGAATCCCAATAATAGAGCATAGGCTCCAGAGGATGAAGGTTCTTTTAGTTCTTGATGATGTTGACAAACTGGAGCACTTGGAGGCAACTGTTGGAGGGCTTGATTGGTTTGGTTCTGGCAGCAGAATCATCATTACAACTAGGGACAAGCATTTGTTAACAAGTCATGGGGTTGAGAAAACTTATGAGCTAGATGGGTTGAATAACAAAGAAGCTCTTCAATTACTTAGTTGGAATGCTTTTAAAACTGACAAAGTTGATTCGAGTTATGTGGACATTTTAAACCGTGCAATAACTTTTGCTTCTGGCCTTCCATTGGCATTGGAGGTAATAGGTTCCAACTTGTTTGGAAAAAGGATAGAAGACTGGGAATCTGCATTAGATCAGTATGGAAGAATTCCTAATAAAGAGATCCAAAAGATACTCGAAGTAAGTTTTCATTCTTTGGAGGAATATGAGCAGAAATTTTTTCTTGATATTGCTTGTTGCTTCAAAGGAAATGATTTAGCATATGTCAAAAAGTTGCTTTATGCTCATCATGGTATCTGCCCGGAATATGGTATTGGAGTGTTGATTGAAAAGTCTCTCATAAAGATTAATGTATCTAGTCATGTAACATTGCATGACCTGATAGAGGACATGGGTAAAGAAGTTGTCCGACGAGAAGCCCCAGAAGAGCCAGGCAAACGTAGTAGATTATGGTTCCCCGATGATATAGTTCAAGTTTTAGAAGATAATACGGGAACTAGTAGTATTCAAATAATAATGTTGGATTTCCTCAACCTCAAATTTGAAGAAGTAGTTGAATGGGATGGAAACGCCTTCAAGGAGATGAAAAACCTCAAAACACTTATTATTAGAAAATTTTGTTTTTCGGAAGATCCCAAACATCTTCCAAATAGTTTGAGAGTACTGGAATGGTGGAGATATCCTTCTCCATCTTTACCGTCTAATTTTCATCCAAAGAAACTTTTTGTGAATATGAGAGTTTTGAATTTTAATGGTTGTCATTGTGTTACAGAGATACCTGATGTGTCTGGTGTTCCAAATTTGGAAGAATTATCATTTGAATGTTGTGATAATTTAATTAAAATTCACAAATCAGTTGGATTCCTGAATAAACTTAAAATCTTGAACGCTGATGGTTGCAAGAAGTTTAGGAGTTTTCCACCCATCGAGTTGACCTCTCTTGAAAAACTCCAGCTTTCATGTTGTCCTTGTCTTGAGAATTTTCCAGAAATATTAGAAAAGATGGAAAATATATGGCATCTTGAAATCCGAGACACTTCCATAAAAGAACTGCCATTTTCAATTCAAAATCTCACTCGGCTTCATTATCTAAAGCTGAGACGTTGTGGAGTTTTTCAGTTACCAAGGAGCATTTTGATGATGCGAGATTTTCGTAATTTTAATTTTGTGGAATGTGAGGGATTGCTTATATCTAAACAGGACGAAGGAGTGAGCTTATCAGTGTTTAAGAACACCTCTGATATTCATATTTCGAAATGCAATATGTCAGACGAATTCATTCGAAAAGGTCTCCCTTTGTTTTTCAATATGCAACGATTACGCCTATCCCAATGTAATCTCACAAGTCTTCCTGCATGTATCAAAGAATGTCTTTTTTTGACAGAAATTGAGTTATTTGTGTGCGAGAATTTTTGGGAAATTGGAGGAATTCCACCCAACTTAGAAACATTCGAAGCATATAATTGCGACTCCTTGAAAGATTTAGACCTCACACTATTTCCTGGATGTTTGACGACACTTATTTTGAGAAATTGCGAGAATCTTCAAGAAATTAGAGGGATTTCACCCAACATAAGAACTTTGTGTGCAACAGAATGCCCATCCTTGACTTCCGAGTGTAGAAGCATGTTACTGAATGAGGTATTGCACGAGGAGGGTGGAGATAGAGTGTTTCTCTTGCCAGAAGCAAGTATTCCAGAGTGGTTTGAGCATTGTACCAATGGACCGTCAATTACTTTCTGGTTTCGTAACAAGGTCCCTGTGATATCTATATTTTTTGCTATTCGATTCAAATTTCACTATTTTGAGCTCAATATTGAAGTCAATGGCATTTCAAAAGTTACAGGAGTGGGTTTCAATTGGAATCCCCTGGTAGGGGATTATACAGTTCTTTGTGATATAAAACAAGAAAAACTTGACGGAATTTTTTCTGATATAGAAGAAAATAAATGGAATTATGTGGTGTGTACTGCATCAAAGATAGAAGAAGAAGTGTTTGTTGTCAAACAAAGTGGAATCCATGTATTCAAACAAGGAAGTCGCATGGAGGACATTCAATTCACCGATCCACTGTTGCTGAAAGAAGAGCATGAGCATAATTTGGAAGACATGACAGATTCTCAGACGATTTACGCAGCACCAAACAATAATGTGAATTGGCATTCAAATTCAGTGGTACCAAAGCTGGGGAGTGGCACTCCCGATTTCCAAGCAAAAATCATGGCAAGGCAAGAATCATTGTTGCGCTCTTCTTCCTTTAGCTATGGATTCAAATACGATGTGTTTCTCAGCTTTAGAGGCGAAGATACTCGTCACGGTTTCACAGGCCATCTCTACAAAGCTCTTCTTGACAGAGGAATCCACACCTTCATTGATGATAAAGAGCTTCAAAGAGGAGAGGAAATCACACCATCACTTGTCAAGGCAATTGAAGAATCCAGGATTTCCATCATTGTGTTCTCCAAGAACTATGCTTCTTCTTCATTTTGCTTGGACGAACTTGTCCATATCCTTCACTCCATCAAGGAAAATGGTCGGTTGGTTTTGCCAGTTTTCTATTACGTTGACCCTTCTGATGTGCGAAAGCATAAAGGTACTTATGGTGAGGCATTGACTAGGCATGAGGAGAGGTTTATGGATAACATGGAGAGGTTGCATAAATGGAAGATGGCTCTGAGCCAAGCAGCTGACTTGTCTGGCTTTCATTTCAAACAACAAGGGAATGAGAATGAATATGAGTTTATTGAGAAGATTGTTAAAGTGGTCTCCAACAAGATCAATCGTGCTCTTCTACATGTTGCAAAGTATCCAGTTGGATTGGAGTCTAAAGTGAAAGAAGTAATCTCACTTCTCAATGTCCGATCTGATGGAGTCCGCATGGTAGGGATCCATGGCATTGGGGGAATAGGGAAGACAACAGTTGCTCGAGCAGTTTATAATGCTATTGCTGATTCATTTCAAGCTTTGTGTTTTCTTGATAATGTGAGAGAAAATTCAATTAAACATGGATTAGAACGTCTCCAAGAGACACTTCTTTCTGATTTAGTAGGAGAGAAGGATATTAAGTTAGCAAGTGTCAATAAAGGAATTTCAATAATAGAGCATAGGCTCCAGAGGAAGAAGGTTCTTTTAGTTCTTGATGATGTTGACAAACTGGAGCATTTGGAGGCAACTGTTGGAGGGCTTGATTGGTTTGGTTCTGGCAGCAGAATCATCATTACAACTAGAGACAAGCATTTGCTCACAAGTCATGGGGTTGAGAAAACTTATGAGCTAGATGGGTTGAATAACAAAGAAGCTCTTGAATTACTTAGTTGGAATGCTTTTAAAACTGATAAAGTTGATTCAAGTTATGTGGACGTTTTAAACCGTGCAATAACTTTTGCTTCTGGCCTTCCACTGGCATTGGAGGTAATGGGTTCTTGCTTGTTTGGGAAAATGATAGAAGAATGGAAATCTGCATTAGATCTGTATGAGAGAATACCTAATAAAGAGATCCAAAAGATACTTGAAGTAAGTTTTCATTCTTTGGGGGAATATGAGCAGAAAATTTTTCTTGATATTGCTTGTTTTTTCAAAGGAAATTATTTAGCATATGTCAAAAAGTTACTTTATGCTCATCATGGTATCTGCCCAGAATATGGTATTGGAGTGTTGATTGAAAAGTCTCTCATAAAGATTAATGTATCTCATCGTGTAACATTGCATGACCTGATAGAGGACATGGGTAAAGAAATTGTCCGACAGGAAGCCCCAGAAGAGCCAGGCAAACGTAGTAGATTATGGTTCCCCAATGATATAGTACAAGTTTTAGAAGATAATACGGAGTTTGTGAATATGAGAGTCTTGAATTTTAATTCTTGTCATTGTATTACAGAGATACCTGACGTGTCTGGTGTTCCAAATTTGGAAGAATTATCATTTGCAAAATGTGAAAATTTAAATAAAATTCACAAATCGGTTGGATTCCTGAATAAACTTAAAATCTTGAACGCTGATGGTTGCAAGAAGTTTAGGAGTTTTCCACCCATCGAGTTGACCTCTCTTGAAAAACTCCAGCTTTCATGTTGTCCTAGTCTTGAGAATTTTCCAGAAATATTAGGACCGATGGAAAAAATAACATATCTTGAAATCCAAGACACTTCCATAAAAGAACTGCCATTTTCAATTCGAAATCTCACTAGGCTTGGAAGACTAATGCTGACATGTTGTGGAGTTTTTCAGTTACCACGGAGCATATTGATGATGCGAGATTTTCGTAATTTTAATTTTGAGGAATGTGAGGGATTGCTTATATCTAAACTGGACGAAGGTGATGCACAAGTGAGCTCATTGGTGTTAAAGAACACCTTTGATATTAACCTTTCGAAATGCAATATGTCAGATGAATTCATTCGAAAAGGTCTCCCTTTGTTTTTAAGTATGGGACGATTATTCCTAGATGAGTGTAATCTCACAAGTCTTCCTGCAAGCATCAAAGAATGTCTCTTTTTGACAGAAATTTTGTTATCTTCGTGCGAGAATTTTCGGGAAATTGGAGGGATTCCACCCAACTTAGAAAAATTCAGAGCATATGAGTGCAGAGCCTTGAAAGATTTAGACCTCACACTATTTCCTGAATGTTTGATGCAACTTATTCTGGAAAGTTGCAAGAATCTTCAAGAAATAAGAGGGATTTCACCCAACATAAGAACTTTGGGTGTAACAGGCTGCCCATCCTTGACTTCCGAATGTAAAAGCATGCTATTGAATGAGGAATTGCACAAGGAGGGTGGAGACAAAGTGTTTGTCTTGCCAGAAACAAGGATTCCAGAGTGGTTTGAGCACTGTACCAATGGACCGTCAATTTCTTTCTGGTTTCGTAACAAGGTCCCTGCGATATCTCTATCTTTTGCTATTCCGCTCGAATTTTACCTTTTTGGGCTCGATATTGAAGTCAACGGCATTTCAAAATATACAGGAGTCGATTTCCATTGGTTTCCCCTGACAGAGGATTATACAGTTCTTTGTGATATAAAACAGGAAAACCTTGACGGAATTTTTTCTGATATAGAAGAAAATAAATGGAATTTTGTAGTGTGTACTGCATCAAACGGAGGAGAAGAAGTGTTTGCCAAACAAAGTGGAATCCATGTATTCAAACAAGGAAGTTGCATGGAGGACATTCAATTCACCGATCCACTGTTGCTGAAAGAAGAGCACGAGCATAGATTGGTGGACATGACAGATTCTCAGACAATTTATGCAGCACCAAACAATAATGTGAATTGGCATTCAAGTTCAATGGTACCAAAGCTGGGGAGTAGCACTCCCGATTTCCAAGGATGTGAAATTGTGTCGAGAAAGAGGAAAATAAGCATGTTAAATGTGGACAGGGACAATGAAGCCTGTGAACCTTCTTGTCCTGCACCTTCAAAAGTGGCTTTGAATTCAGCAGTGTCAAACTTTGCAAGTGGTGCTGCCAGTGAAGAAGCCCAGCATATGAAAGTGTACAAGAGGGATAAAAGGAGGAGGATTTGGGCCAGGCCCATTGCTGAATTAGTAGAGGATTATTCCCAAAGTGACCCCCAACAGAATGCATAG 6717 0.3856 MARQESLLPSSSFSYGWKYDVFISFRGEDTRRGFTGNLYKALHDKGIHTFIDDKELQRGEEITPSLVNAIEESRIAITVFSKNYASSSFCLDELVHILHSIKEKGRLILPVFYYVDPSDVRHQRGSYEEALATHEKRFKDDMEKVRKWRMALRQVAHLSGFHFKQEGYCFYLPMNENEYEFIQKIIKEVSNKINRTPLHVEKYRVGLESKVKEVISLLNVRSDGVRMIGIHGIGGIGKTTVARAVYNVIADSFEALCFLDNMRENSIKHGFEHLQETLLSDLVGEKDIKLSSVNKGIPIIEHRLQRMKVLLVLDDVDKLEHLEATVGGLDWFGSGSRIIITTRDKHLLTSHGVEKTYELDGLNNKEALQLLSWNAFKTDKVDSSYVDILNRAITFASGLPLALEVIGSNLFGKRIEDWESALDQYGRIPNKEIQKILEVSFHSLEEYEQKFFLDIACCFKGNDLAYVKKLLYAHHGICPEYGIGVLIEKSLIKINVSSHVTLHDLIEDMGKEVVRREAPEEPGKRSRLWFPDDIVQVLEDNTGTSSIQIIMLDFLNLKFEEVVEWDGNAFKEMKNLKTLIIRKFCFSEDPKHLPNSLRVLEWWRYPSPSLPSNFHPKKLFVNMRVLNFNGCHCVTEIPDVSGVPNLEELSFECCDNLIKIHKSVGFLNKLKILNADGCKKFRSFPPIELTSLEKLQLSCCPCLENFPEILEKMENIWHLEIRDTSIKELPFSIQNLTRLHYLKLRRCGVFQLPRSILMMRDFRNFNFVECEGLLISKQDEGVSLSVFKNTSDIHISKCNMSDEFIRKGLPLFFNMQRLRLSQCNLTSLPACIKECLFLTEIELFVCENFWEIGGIPPNLETFEAYNCDSLKDLDLTLFPGCLTTLILRNCENLQEIRGISPNIRTLCATECPSLTSECRSMLLNEVLHEEGGDRVFLLPEASIPEWFEHCTNGPSITFWFRNKVPVISIFFAIRFKFHYFELNIEVNGISKVTGVGFNWNPLVGDYTVLCDIKQEKLDGIFSDIEENKWNYVVCTASKIEEEVFVVKQSGIHVFKQGSRMEDIQFTDPLLLKEEHEHNLEDMTDSQTIYAAPNNNVNWHSNSVVPKLGSGTPDFQAKIMARQESLLRSSSFSYGFKYDVFLSFRGEDTRHGFTGHLYKALLDRGIHTFIDDKELQRGEEITPSLVKAIEESRISIIVFSKNYASSSFCLDELVHILHSIKENGRLVLPVFYYVDPSDVRKHKGTYGEALTRHEERFMDNMERLHKWKMALSQAADLSGFHFKQQGNENEYEFIEKIVKVVSNKINRALLHVAKYPVGLESKVKEVISLLNVRSDGVRMVGIHGIGGIGKTTVARAVYNAIADSFQALCFLDNVRENSIKHGLERLQETLLSDLVGEKDIKLASVNKGISIIEHRLQRKKVLLVLDDVDKLEHLEATVGGLDWFGSGSRIIITTRDKHLLTSHGVEKTYELDGLNNKEALELLSWNAFKTDKVDSSYVDVLNRAITFASGLPLALEVMGSCLFGKMIEEWKSALDLYERIPNKEIQKILEVSFHSLGEYEQKIFLDIACFFKGNYLAYVKKLLYAHHGICPEYGIGVLIEKSLIKINVSHRVTLHDLIEDMGKEIVRQEAPEEPGKRSRLWFPNDIVQVLEDNTEFVNMRVLNFNSCHCITEIPDVSGVPNLEELSFAKCENLNKIHKSVGFLNKLKILNADGCKKFRSFPPIELTSLEKLQLSCCPSLENFPEILGPMEKITYLEIQDTSIKELPFSIRNLTRLGRLMLTCCGVFQLPRSILMMRDFRNFNFEECEGLLISKLDEGDAQVSSLVLKNTFDINLSKCNMSDEFIRKGLPLFLSMGRLFLDECNLTSLPASIKECLFLTEILLSSCENFREIGGIPPNLEKFRAYECRALKDLDLTLFPECLMQLILESCKNLQEIRGISPNIRTLGVTGCPSLTSECKSMLLNEELHKEGGDKVFVLPETRIPEWFEHCTNGPSISFWFRNKVPAISLSFAIPLEFYLFGLDIEVNGISKYTGVDFHWFPLTEDYTVLCDIKQENLDGIFSDIEENKWNFVVCTASNGGEEVFAKQSGIHVFKQGSCMEDIQFTDPLLLKEEHEHRLVDMTDSQTIYAAPNNNVNWHSSSMVPKLGSSTPDFQGCEIVSRKRKISMLNVDRDNEACEPSCPAPSKVALNSAVSNFASGAASEEAQHMKVYKRDKRRRIWARPIAELVEDYSQSDPQQNA 2238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2987g00031 2238 Gene3D - 1303 1466 IPR027417 -
Gabi2987g00031 2238 FunFam Disease resistance protein (TIR-NBS-LRR class) 1134 1306 - -
Gabi2987g00031 2238 Pfam TIR domain 18 197 IPR000157 GO:0007165
Gabi2987g00031 2238 Pfam TIR domain 1136 1306 IPR000157 GO:0007165
Gabi2987g00031 2238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1301 1566 IPR027417 -
Gabi2987g00031 2238 SUPERFAMILY L domain-like 1634 1954 - -
Gabi2987g00031 2238 SMART till_3 18 158 IPR000157 GO:0007165
Gabi2987g00031 2238 SMART till_3 1136 1276 IPR000157 GO:0007165
Gabi2987g00031 2238 Gene3D Ribonuclease Inhibitor 1643 1740 IPR032675 -
Gabi2987g00031 2238 Gene3D - 15 193 IPR035897 -
Gabi2987g00031 2238 Gene3D Ribonuclease Inhibitor 703 922 IPR032675 -
Gabi2987g00031 2238 Gene3D Ribonuclease Inhibitor 1741 1967 IPR032675 -
Gabi2987g00031 2238 SUPERFAMILY Toll/Interleukin receptor TIR domain 1127 1279 IPR035897 -
Gabi2987g00031 2238 PRINTS Disease resistance protein signature 1338 1353 - -
Gabi2987g00031 2238 PRINTS Disease resistance protein signature 1507 1521 - -
Gabi2987g00031 2238 PRINTS Disease resistance protein signature 1722 1738 - -
Gabi2987g00031 2238 PRINTS Disease resistance protein signature 1414 1428 - -
Gabi2987g00031 2238 SUPERFAMILY L domain-like 516 919 - -
Gabi2987g00031 2238 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 761 IPR044974 GO:0006952
Gabi2987g00031 2238 ProSiteProfiles TIR domain profile. 17 193 IPR000157 GO:0007165
Gabi2987g00031 2238 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 195 - -
Gabi2987g00031 2238 Gene3D Ribonuclease Inhibitor 540 702 IPR032675 -
Gabi2987g00031 2238 Gene3D - 194 357 IPR027417 -
Gabi2987g00031 2238 Pfam NB-ARC domain 208 440 IPR002182 GO:0043531
Gabi2987g00031 2238 Pfam NB-ARC domain 1319 1547 IPR002182 GO:0043531
Gabi2987g00031 2238 Gene3D - 1132 1302 IPR035897 -
Gabi2987g00031 2238 SMART AAA_5 1335 1473 IPR003593 GO:0016887
Gabi2987g00031 2238 SMART AAA_5 224 362 IPR003593 GO:0016887
Gabi2987g00031 2238 Gene3D - 1472 1556 IPR042197 -
Gabi2987g00031 2238 SUPERFAMILY "Winged helix" DNA-binding domain 431 539 IPR036390 -
Gabi2987g00031 2238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 455 IPR027417 -
Gabi2987g00031 2238 ProSiteProfiles TIR domain profile. 1135 1304 IPR000157 GO:0007165
Gabi2987g00031 2238 Gene3D - 361 449 IPR042197 -
Gabi2987g00031 2238 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 161 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2987g00031 Gabi-Chr2987 278587 293965 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2987g00031 9 770 WRKY Transcription Factor Family AT4G12020 29.136 5.97e-82 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2987g00031 - - gmx:121173697 2185.61