Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2986g00034 ATGGTGGGTGCTGGAAATGGAGAGCGACCACCTTGGAAGGAGGCGGCCACGGCGGATGATGGTGGGCCACCACCACGACCCACCATCACTCTACCGCCACGTACTGCTTCCATGGACACCCTTTTCAACGGTGGTTTCAGCCCCGGTCCCATGACTCTGGTCTCTAGTTTCTTTGCCGAGGGTGAAGATTTTAAGTCCTTCTCTCAGCTTCTCACCGGTTCCATGGCGTCTCCGGTGGGCTTGCACAATTCACCTGGCTTCTTTTCACCTGCTCAGGGGTCCTTTGGAATGACACACCAGCAGGCACTAGCACAAGTCTCAGCTCAGGCTGCACAGGCCAACTCAAATATGCATATCCAAGCTGAACATTCATTGTCTGTATCAGCATCTCCTGCTACCTTGTTGACACAGGTTGTTGCAGCGACTTCCAATACTACACAACTGCTTATGCCATCCTCAATGGGAGACTCTCGGGCAGCAATGACAAAATCCAGTGATTATTCTCACCCTGAACAAAGATTGCAGTCTTCTTTACTGAATGTTGATAAGCCTGCTGATGATGGCTACAACTGGAGGAAGTATGGGCAGAAACAGGTGAAGGGTAGTGAGTTTCCTCGAAGTTATTATAAGTGCACGCATCCAAACTGTCCTGTCAAGAAAAAAGTTGAGCGCTCACTTGACGGTCATGTAACTGCAATTATTTATAAAGGAGAGCACAATCATCAACCTCCTCATCCTAACAAGCGCTCAAAAGACACCGTAACTTCAAATGAAAATTCAAGTATGCAAGGGAATGTTGATTCAACTTGTCAAGGAATAACTACACACTCAATGTCTAAGACTGATCCAGAATCTAGTCAGGCAACAGCTGAACATCTATCAGGAACAAGTGACAGTGAGGAAGTAGGTGACCATGAAACTGAAGTGGATGAGAAAAATGTTGAGCCTGACCCCAAGAGGAGAATTACAGAAGCGACATCCTCAGATCCAGCTTCTTCACATAGGACTGTCACAGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTCTTAGATGATGGGTATAGATGGCGAAAATATGGGCAGAAAGTTGTCAAAGGCAACCCTTATCCTAGGAGCTATTACAAATGTACAACCCCAGGTTGTAATGTCCGGAAGCATGTTGAGAGAGCCTCAACAGATCCTAAAGCTGTTATAACAACATATGAAGGAAAACACAATCATGATGTGCCAGCAGCTAAGACTAACAGCCACACCATTGCCAACAATAGTGCATCTCAGTTAAGATCACAAAATACCATACCTGAGAAGCATAGTTTAGGCAGCAGAGGTATTGGGGGCAATGAGCAACCGCCTGTTGCACATCTACGGCTGAAGGAAGAGCAGATAACTTAG 1401 0.4625 MVGAGNGERPPWKEAATADDGGPPPRPTITLPPRTASMDTLFNGGFSPGPMTLVSSFFAEGEDFKSFSQLLTGSMASPVGLHNSPGFFSPAQGSFGMTHQQALAQVSAQAAQANSNMHIQAEHSLSVSASPATLLTQVVAATSNTTQLLMPSSMGDSRAAMTKSSDYSHPEQRLQSSLLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLDGHVTAIIYKGEHNHQPPHPNKRSKDTVTSNENSSMQGNVDSTCQGITTHSMSKTDPESSQATAEHLSGTSDSEEVGDHETEVDEKNVEPDPKRRITEATSSDPASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNSASQLRSQNTIPEKHSLGSRGIGGNEQPPVAHLRLKEEQIT 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2986g00034 466 ProSiteProfiles WRKY domain profile. 186 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2986g00034 466 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 435 IPR044810 GO:0003700
Gabi2986g00034 466 MobiDBLite consensus disorder prediction 253 296 - -
Gabi2986g00034 466 MobiDBLite consensus disorder prediction 297 324 - -
Gabi2986g00034 466 MobiDBLite consensus disorder prediction 1 34 - -
Gabi2986g00034 466 SUPERFAMILY WRKY DNA-binding domain 345 413 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2986g00034 466 MobiDBLite consensus disorder prediction 325 339 - -
Gabi2986g00034 466 ProSiteProfiles WRKY domain profile. 348 413 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2986g00034 466 FunFam WRKY transcription factor 172 245 - -
Gabi2986g00034 466 Pfam WRKY DNA -binding domain 354 410 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2986g00034 466 Pfam WRKY DNA -binding domain 186 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2986g00034 466 SUPERFAMILY WRKY DNA-binding domain 183 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2986g00034 466 MobiDBLite consensus disorder prediction 427 466 - -
Gabi2986g00034 466 MobiDBLite consensus disorder prediction 236 339 - -
Gabi2986g00034 466 MobiDBLite consensus disorder prediction 151 170 - -
Gabi2986g00034 466 Gene3D WRKY domain 338 414 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2986g00034 466 Gene3D WRKY domain 174 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2986g00034 466 SMART WRKY_cls 185 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2986g00034 466 SMART WRKY_cls 353 412 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2986g00034 466 FunFam WRKY transcription factor 33 340 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2986g00034 Gabi-Chr2986 285767 292364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2986g00034 26 466 WRKY Transcription Factor Family AT2G03340 52.107 1.14e-150 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2986g00034 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2986g00034 - - gmx:100127369 741.11