Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2984g00001 ATGTTGTTGTCATCCACTTGCATGTATTCTCTACCAAGTACATTCTCCACTAGCCCAGCTTTAAAGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGGTGGCACCTCCGAGAGCATCAAGTATGACACCGTTTCTGAAGGGGGGGTTCCACACGGCTACATTGGTGGTGGAAGCGCAAGTTCAACCCCTGCTTTGGACTACACAAACCCCAATCAATCCCCAATTGGTAACACCACCCCTGGAGGGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCGTTGGTGGACATGACTGGATCCAACGAGTGGATAGCACAGATGGAGCCAGGTGTTCACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATCTCAAAAGGATTCGCTTCTGCCGAGACATGTTTGATAAGTCGCGAGCCCAGAGGTGGTGGGCTGAGTATTACGACAGGATCAGGGAGCTTCTTAATATCCAGACTTTAAATCAACGTGTTTTCATCACTCCTGCACGGTCTGATGATAATGAGAACTCGGGGGAATCTGAACAAGATATCCCAATGGATTCAATGCTGAACACGGATTCGACTCCGGGGAATTTCCATGCACCCGCTGGGAATATGGGGTATTTCCATGGTGGGATATCAAGGGCTAACAACCCTACTGACAATGACATGGATGCTGAATGGGTTGAGCAGGACGATCCTGGAGTGTTAATCACTGTGAAGAGGTCAGCTAATGGGACCAGGCAAATTCGCCGTATCAAATTCAGCCGGGAAATTTTTGATGCAGATGCAGCCAAGGATTGGTGGCTGCGCAACAGGGTTCGAGTTCATGCTCAGTTATATGGAGTGTAG 864 0.4907 MLLSSTCMYSLPSTFSTSPALKIKDLALKLSGKKIKGGTSESIKYDTVSEGGVPHGYIGGGSASSTPALDYTNPNQSPIGNTTPGGRQPQPPAGSVALVDMTGSNEWIAQMEPGVHITVVSLPTGGNDLKRIRFCRDMFDKSRAQRWWAEYYDRIRELLNIQTLNQRVFITPARSDDNENSGESEQDIPMDSMLNTDSTPGNFHAPAGNMGYFHGGISRANNPTDNDMDAEWVEQDDPGVLITVKRSANGTRQIRRIKFSREIFDADAAKDWWLRNRVRVHAQLYGV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2984g00001 287 ProSiteProfiles BRX domain profile. 230 285 IPR013591 -
Gabi2984g00001 287 MobiDBLite consensus disorder prediction 172 200 - -
Gabi2984g00001 287 MobiDBLite consensus disorder prediction 65 89 - -
Gabi2984g00001 287 MobiDBLite consensus disorder prediction 64 94 - -
Gabi2984g00001 287 Pfam Transcription factor regulating root and shoot growth via Pin3 105 157 IPR013591 -
Gabi2984g00001 287 Pfam Transcription factor regulating root and shoot growth via Pin3 230 283 IPR013591 -
Gabi2984g00001 287 PANTHER PROTEIN BREVIS RADIX-LIKE 1 22 283 IPR044532 -
Gabi2984g00001 287 ProSiteProfiles BRX domain profile. 105 160 IPR013591 -
Gabi2984g00001 287 MobiDBLite consensus disorder prediction 185 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2984g00001 Gabi-Chr2984 8445 10092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2984g00001 21 284 Major Intrinsic Protein MIP AT1G31880 42.718 4.08e-70 219