Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi297g00006 ATGGCCCCTGAAAAACTTAGTTGTTGTGCAAGATTCCTTGAAAACTCTAAGCCCTACTTTGCCATGATCTCTTTACAATTTGGCTATGCTGGCATGAACATTATCACTAAGGTTTCCCTTAACCAAGGCATGAGTCATTATGTACTTGTGGTTTATCGCCATGCCTTTGCAACTGCTGTCATCGCTCCATTTGCCTTCATTTTTGAAAGGAAAGGTCAACCAAAGATAACATTCCCAATTTTCATGCAAATTTTCATCCTAGCTTTGCTCGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCAGCCATGACTTTTGTTATGGCAATTTTATGCAGGATGGAGAAGATAAACATAAAGAAACTGAGATGCCAAGCAAAGGTAGTGGGAACAATAGTGACAGTGGCTGGGGCAATGTTGATGACCTTATACAGAGGACCTATTGTGGAGATGGTATGGGCCAAACATAACCATCATCACAATGAAACCTATGCAAAAAGCACAACAGGATCCTCAGATAAAGATTGGTTCTTAGGATGTCTCTTCCTTATCATTGCCACACTTGCTTGGGCCTCCCTCTTTGTTTTACAAGCCAAAGCTATAGAAACGTACAAGAATCATCAGCTAAGCCTCACTTCACTTGTGTGCTTCATAGGAACTCTTCAAGCTGTTGCTGTTACTTTTGTTGTGGAACACAATCCTTCTGTGTGGAGAATTGGCTGGGATATGAGCTTACTTGCTGCTGCCTATGCTGGGATTGTGACCTCTAGCATATCATACTATGTACAAGGGCTTGTGATTAAGACGAAAGGGCCTGTCTTTGCAACTGCCTTTAGCCCTCTAATGATGATCATAGTTGCCATCATGGGTTCCTTTATCCTTGCAGAGCAGATTTATCTTGGAGGTGTGATTGGTGCCGTCTTGATTATTATAGGCTTATACTCTGTCCTGTGGGGAAAACACAAAGAACGAAAAGAGAACAAAGTGGCAGATGATATTCCATTGCCTTTAAAGGGTGAGCCAGTGATTAATGCCACAGATCATTTTACTGAAGCCAACAACAAGGTCTCTTCAGTTGTATTAAGCATGCCTATTCAAGAGGATCCCATGAAACATAACCAAGAGACAAAGGCTTAA 1188 0.4192 MAPEKLSCCARFLENSKPYFAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATAVIAPFAFIFERKGQPKITFPIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAILCRMEKINIKKLRCQAKVVGTIVTVAGAMLMTLYRGPIVEMVWAKHNHHHNETYAKSTTGSSDKDWFLGCLFLIIATLAWASLFVLQAKAIETYKNHQLSLTSLVCFIGTLQAVAVTFVVEHNPSVWRIGWDMSLLAAAYAGIVTSSISYYVQGLVIKTKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGAVLIIIGLYSVLWGKHKERKENKVADDIPLPLKGEPVINATDHFTEANNKVSSVVLSMPIQEDPMKHNQETKA 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi297g00006 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 340 - -
Gabi297g00006 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
Gabi297g00006 395 PANTHER WAT1-RELATED PROTEIN 18 341 IPR030184 GO:0016020|GO:0022857
Gabi297g00006 395 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Gabi297g00006 395 Pfam EamA-like transporter family 195 334 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi297g00006 Gabi-Chr297 101220 104122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi297g00006 1 390 Nodulin-like Gene Family AT5G07050 67.407 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi297g00006 - - gmx:100804390 665.611