Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2974g00014 ATGGGAACTTCAGAAGAGAGGGTCGTGGCTGTGATCATGGTTGGAGGACCCACCAAAGGAACCAGATTCCGGCCATTGTCATTTAACATACCCAAGCCACTCTTTCCATTAGCAGGACAACCAATGGTTCATCATCCAATTTCTGCTTGTAAAAGGATTCCTAATTTGGCTCAGATTTATCTTATTGGTTTCTATGAAGAACGTGAATTTGCATTATATGTATCCTCCATCTCAAATGAGCTTAAAGTCCCTGTTAGATACTTGAAGGAAGACAAGCCACATGGTTCGGCTGGTTGTCTTTATAACTTCAGAGATCTGATCATGGAGGAGGATCCGGCACATATTTTCTTGCTGAACTGTGATGTTTGCTGCAGTTTTCCACTGCCAGAAATGCTGGATGCTCACAGAAGACATGGTGGCATGGGAACAATACTAGTTGTGAAGGTTTCTGCAGAGTCAGCAAGCCAGTTTGGGGAATTGGTAGCTGATCCAACAACCAATGAACTCTTGCATTACACAGAGAAACCTGAAACATTTGTAAGTGATCGAATAAACTGCGGTGTGTATATATTTACACCAGATATCTTTACAGCCATCGAGGGTGTTTCTACTCAGCGGAAAGACAGAGCTAATCTAAGACGTGTCTCCAGCTTTGAAGCAATGCAGCCAGACACAAGGAGTCTTCCTGCCAATTATGTTAGATTGGATCAAGATATCCTCACACCTCTTGCAGGGAAGAAACAGTTATACATATATGAAACAAAGGACTTTTGGGAACAAATCAAGACTCCTGGAATGTCCATAAAATGTTCTGCCTTGTATCTTTCCCAATTTCGTTATACAAACCCCCATCTTTTGGCAAATGGAGATGGTACTAAGAAAGCCAGCATCATTGGGGACGTTTATATTCACCCATCAGCAAAAGTGCATCCCTCTGCAAAGATTGGTCCTAGTGTATCAATATCTGCAAATGCTCGTATAGGAGCTGGTGCAAGGCTCATCAGTTGTATCATCCTTGATGGTGTTGAAATCAAGGAGAATGCTGTTGTTATTCATGCAATTGTTGGATGGAAATCCTCTGTTGGACGATGGGCCCGTGTCCAGGCTAGTGGAGACTATAATGCAAAATTCGGCGTCACTATACTTGGTGAATCTGTAACCGTTGAGGATGAGGTAGTGGTTGTTAATAGCATTGTCCTTCCGCACAAGACCCTAAATGTCGGCGTTCAAGATGAGATTCTTCTATAG 1248 0.4271 MGTSEERVVAVIMVGGPTKGTRFRPLSFNIPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFYEEREFALYVSSISNELKVPVRYLKEDKPHGSAGCLYNFRDLIMEEDPAHIFLLNCDVCCSFPLPEMLDAHRRHGGMGTILVVKVSAESASQFGELVADPTTNELLHYTEKPETFVSDRINCGVYIFTPDIFTAIEGVSTQRKDRANLRRVSSFEAMQPDTRSLPANYVRLDQDILTPLAGKKQLYIYETKDFWEQIKTPGMSIKCSALYLSQFRYTNPHLLANGDGTKKASIIGDVYIHPSAKVHPSAKIGPSVSISANARIGAGARLISCIILDGVEIKENAVVIHAIVGWKSSVGRWARVQASGDYNAKFGVTILGESVTVEDEVVVVNSIVLPHKTLNVGVQDEILL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2974g00014 415 Gene3D Hexapeptide repeat proteins 286 410 - -
Gabi2974g00014 415 FunFam Putative GDP-mannose pyrophosphorylase 284 412 - -
Gabi2974g00014 415 Pfam Nucleotidyl transferase 10 211 IPR005835 GO:0009058
Gabi2974g00014 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 278 IPR029044 -
Gabi2974g00014 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 9 414 - -
Gabi2974g00014 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Gabi2974g00014 415 FunFam Mannose-1-phosphate guanyltransferase alpha 7 278 - -
Gabi2974g00014 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 357 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2974g00014 Gabi-Chr2974 157581 163501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2974g00014 4 350 Eukaryotic Initiation Factors Gene Family AT2G34970 21.750 8.18e-07 49.3