Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2974g00013 ATGGGAACTTCAGAAGAGAGGGTCGTGGCTGTGATCATGGTTGGAGGACCCACCAAAGGAACCAGATTCCGGCCATTGTCATTTAACATACCCAAGCCACTCTTTCCATTAGCAGGACAACCAATGGTTCATCATCCAATTTCTGCTTGTAAAAGGATTCCTAATTTGGCTCAGATTTATCTTATTGGTTTCTATGAAGAACGTGAATTTGCATTATATGTATCCTCCATCTCAAATGAGCTTAAAGTCCCTGTTAGATACTTGAAGGAAGACAAGCCACATGGTTCGGCTGGTTGTCTTTATAACTTCAGAGATCTGATCATGGAGGAGGATCCGGCACATATTTTCTTGCTGAACTGTGATGTTTGCTGCAGTTTTCCACTGCCAGAAATGCTGGATGCTCACAGAAGACATGGTGGCATGGGAACAATACTAGTTGTGAAGGTTTCTGCAGAGTCAGCAAGCCAGTTTGGGGAATTGGTAGCTGATCCAACAACCAATGAACTCTTGCATTACACAGAGAAACCTGAAACATTTGTAAGTGATCGAATAAACTGCGGTGTGTATATATTTACACCAGATATCTTTACAGCCATCGAGGGTGTTTCTACTCAGCGGAAAGACAGAGCTAATCTAAGACGTGTCTCCAGCTTTGAAGCAATGCAGCCAGACACAAGTCTTCCTGCCAATTATGTTAGATTGGATCAAGATATCCTCACACCTCTTGCAGGGAAGAAACAGTTATACATATATGAAACAAAGGACTTTTGGGAACAAATCAAGACTCCTGGAATGTCCATAAAATGTTCTGCCTTGTATCTTTCCCAATTTCGTTATACAAACCCCCATCTTTTGGCAAATGGAGATGGTACTAAGAAAGCCAGCATCATTGGGGACGTTTATATTCACCCATCAGCAAAAGTGCATCCCTCTGCAAAGATTGGTCCTAGTGTATCAATATCTGCAAATGCTCGTATAGGAGCTGGTGCAAGGCTCATCAGTTGTATCATCCTTGATGGTGTTGAAATCAAGGAGAATGCTGTTGTTATTCATGCAATTGTTGGATGGAAATCCTCTGTTGGACGATGGGCCCGTGTCCAGGCTAGTGGAGACTATAATGCAAAATTCGGCGTCACTATACTTGGTGAATCTGTAACCGTTGAGGATGAGGTAGTGGTTGTTAATAGCATTGTCCTTCCGCACAAGACCCTAAATGTCGGCGTTCAAGATGAGATTCTTCTATAG 1245 0.4265 MGTSEERVVAVIMVGGPTKGTRFRPLSFNIPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFYEEREFALYVSSISNELKVPVRYLKEDKPHGSAGCLYNFRDLIMEEDPAHIFLLNCDVCCSFPLPEMLDAHRRHGGMGTILVVKVSAESASQFGELVADPTTNELLHYTEKPETFVSDRINCGVYIFTPDIFTAIEGVSTQRKDRANLRRVSSFEAMQPDTSLPANYVRLDQDILTPLAGKKQLYIYETKDFWEQIKTPGMSIKCSALYLSQFRYTNPHLLANGDGTKKASIIGDVYIHPSAKVHPSAKIGPSVSISANARIGAGARLISCIILDGVEIKENAVVIHAIVGWKSSVGRWARVQASGDYNAKFGVTILGESVTVEDEVVVVNSIVLPHKTLNVGVQDEILL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2974g00013 414 CDD M1P_guanylylT_A_like_N 10 273 - -
Gabi2974g00013 414 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 277 IPR029044 -
Gabi2974g00013 414 Pfam Nucleotidyl transferase 10 222 IPR005835 GO:0009058
Gabi2974g00013 414 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 356 IPR029044 -
Gabi2974g00013 414 Gene3D Hexapeptide repeat proteins 285 409 - -
Gabi2974g00013 414 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 9 413 - -
Gabi2974g00013 414 FunFam Mannose-1-phosphate guanyltransferase alpha 7 277 - -
Gabi2974g00013 414 FunFam Putative GDP-mannose pyrophosphorylase 283 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2974g00013 Gabi-Chr2974 157581 163501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2974g00013 4 349 Eukaryotic Initiation Factors Gene Family AT2G34970 21.805 5.51e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2974g00013 K00966 - gmx:100780801 756.133