Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2974g00012 ATGGGAACTTCAGAAGAGAGGGTCGTGGCTGTGATCATGGTTGGAGGACCCACCAAAGGAACCAGATTCCGGCCATTGTCATTTAACATACCCAAGCCACTCTTTCCATTAGCAGGACAACCAATGGTTCATCATCCAATTTCTGCTTGTAAAAGGATTCCTAATTTGGCTCAGATTTATCTTATTGGTTTCTATGAAGAACGTGAATTTGCATTATATGTATCCTCCATCTCAAATGAGCTTAAAGTCCCTGTTAGATACTTGAAGGAAGACAAGCCACATGGTTCGGCTGGTTGTCTTTATAACTTCAGAGATCTGATCATGGAGGAGGATCCGGCACATATTTTCTTGCTGAACTGTGATGTTTGCTGCAGTTTTCCACTGCCAGAAATGCTGGATGCTCACAGAAGACATGGTGGCATGGGAACAATACTAGTTGTGAAGGTTTCTGCAGAGTCAGCAAGCCAGTTTGGGGAATTGGTAGCTGATCCAACAACCAATGAACTCTTGCATTACACAGAGAAACCTGAAACATTTGTAAGTGATCGAATAAACTGCGGTGTGTATATATTTACACCAGATATCTTTACAGCCATCGAGGGTGTTTCTACTCAGCGGAAAGACAGAGCCTCGGTGTACTGGTTGATCTGCAGGAGTCTTCCTGCCAATTATGTTAGATTGGATCAAGATATCCTCACACCTCTTGCAGGGAAGAAACAGTTATACATATATGAAACAAAGGACTTTTGGGAACAAATCAAGACTCCTGGAATGTCCATAAAATGTTCTGCCTTGTATCTTTCCCAATTTCGTTATACAAACCCCCATCTTTTGGCAAATGGAGATGGTACTAAGAAAGCCAGCATCATTGGGGACGTTTATATTCACCCATCAGCAAAAGTGCATCCCTCTGCAAAGATTGGTCCTAGTGTATCAATATCTGCAAATGCTCGTATAGGAGCTGGTGCAAGGCTCATCAGTTGTATCATCCTTGATGGTGTTGAAATCAAGGAGAATGCTGTTGTTATTCATGCAATTGTTGGATGGAAATCCTCTGTTGGACGATGGGCCCGTGTCCAGGCTAGTGGAGACTATAATGCAAAATTCGGCGTCACTATACTTGGTGAATCTGTAACCGTTGAGGATGAGGTAGTGGTTGTTAATAGCATTGTCCTTCCGCACAAGACCCTAAATGTCGGCGTTCAAGATGAGATTCTTCTATAG 1224 0.4281 MGTSEERVVAVIMVGGPTKGTRFRPLSFNIPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFYEEREFALYVSSISNELKVPVRYLKEDKPHGSAGCLYNFRDLIMEEDPAHIFLLNCDVCCSFPLPEMLDAHRRHGGMGTILVVKVSAESASQFGELVADPTTNELLHYTEKPETFVSDRINCGVYIFTPDIFTAIEGVSTQRKDRASVYWLICRSLPANYVRLDQDILTPLAGKKQLYIYETKDFWEQIKTPGMSIKCSALYLSQFRYTNPHLLANGDGTKKASIIGDVYIHPSAKVHPSAKIGPSVSISANARIGAGARLISCIILDGVEIKENAVVIHAIVGWKSSVGRWARVQASGDYNAKFGVTILGESVTVEDEVVVVNSIVLPHKTLNVGVQDEILL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2974g00012 407 FunFam Mannose-1-phosphate guanyltransferase alpha 7 270 - -
Gabi2974g00012 407 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 349 IPR029044 -
Gabi2974g00012 407 FunFam Putative GDP-mannose pyrophosphorylase 276 404 - -
Gabi2974g00012 407 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 270 IPR029044 -
Gabi2974g00012 407 Gene3D Hexapeptide repeat proteins 278 402 - -
Gabi2974g00012 407 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 9 406 - -
Gabi2974g00012 407 Pfam Nucleotidyl transferase 10 204 IPR005835 GO:0009058
Gabi2974g00012 407 CDD M1P_guanylylT_A_like_N 10 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2974g00012 Gabi-Chr2974 157581 163501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2974g00012 4 342 Eukaryotic Initiation Factors Gene Family AT2G34970 21.628 6.46e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2974g00012 K00966 - gmx:100780801 724.546