Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2974g00004 ATGATGGCTGCCGCCGGCGATGTTCTCAGGCAGAGTTTGCCGGATGTTGGTGCAGCTGAGCTGCACGTGCTTGCAGTTGATGACAGCCATGTGGACCGTAAGGTCATTGAACGGTTGCTAAAAATCTCTTCTTGCAAAGTGACTGTGGTAGAGAGTGGAACCAGAGCTCTACAATATCTGGGTTTGGATGGAGACAAGAGCTCCATTGGTTTTGATAGTGTGAAGGTTAATCTGATAATGACAGACTATTCCATGCCGGGGATGACAGGATACGAACTACTCAAAAAGATAAAGCAGGAGTCATCTGTATTTAGAGAGATTCCAGTGGTGGTTATGTCATCTGAGAATATCTTGACCCGAATTGATAGTTGCTTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCTGTAAAGTTATCAGATGTAAAACGCTTAACAAATTTCATAATGAGAGGTGAAGGCAAGAAGGGAGAAAAAAAATGTCAAAAAAGAAGCCGATCAGATGATTGCAGCAGTCCATCTTTATCAACTGCATTCTCATCAGTTGCTCATTCATGCGATCTATCATCACTGTCACCATCTGCATTGTCCTCAAAGAAATCTAGGTTGTGTGCAGAAATTTAG 624 0.4327 MMAAAGDVLRQSLPDVGAAELHVLAVDDSHVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDKSSIGFDSVKVNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRLTNFIMRGEGKKGEKKCQKRSRSDDCSSPSLSTAFSSVAHSCDLSSLSPSALSSKKSRLCAEI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2974g00004 207 Pfam Response regulator receiver domain 23 143 IPR001789 GO:0000160
Gabi2974g00004 207 Gene3D - 21 189 - -
Gabi2974g00004 207 SUPERFAMILY CheY-like 21 151 IPR011006 -
Gabi2974g00004 207 ProSiteProfiles Response regulatory domain profile. 22 150 IPR001789 GO:0000160
Gabi2974g00004 207 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 167 IPR045279 GO:0009736
Gabi2974g00004 207 CDD REC_typeA_ARR 23 145 - -
Gabi2974g00004 207 SMART REC_2 21 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2974g00004 Gabi-Chr2974 33675 36512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2974g00004 21 173 Response Regulator Gene Family AT5G62920 73.203 1.80e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2974g00004 Response_reg 9.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2974g00004 K14492 - gmx:100306152 297.745