Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2974g00003 ATGATGGCTGCCGCCGGCGATGTTCTCAGGCAGAGTTTGCCGGATGTTGGTGCAGCTGAGCTGCACGTGCTTGCAGTTGATGACAGCCATGTGGACCGTAAGGTCATTGAACGGTTGCTAAAAATCTCTTCTTGCAAAGTGACTGTGGTAGAGAGTGGAACCAGAGCTCTACAATATCTGGGTTTGGATGGAGACAAGAGCTCCATTGGTTTTGATAGTGTGAAGGTTAATCTGATAATGACAGACTATTCCATGCCGGGGATGACAGGATACGAACTACTCAAAAAGATAAAGGAGTCATCTGTATTTAGAGAGATTCCAGTGGTGGTTATGTCATCTGAGAATATCTTGACCCGAATTGATAGTTGCTTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCTGTAAAGTTATCAGATGTAAAACGCTTAACAAATTTCATAATGAGAGGTGAAGGCAAGAAGGGAGAAAAAAAATGTCAAAAAAGAAGCCGATCAGATGATTGCAGCAGTCCATCTTTATCAACTGCATTCTCATCAGTTGCTCATTCATGCGATCTATCATCACTGTCACCATCTGCATTGTCCTCAAAGAAATCTAGGTTGTGTGCAGAAATTTAG 621 0.4316 MMAAAGDVLRQSLPDVGAAELHVLAVDDSHVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDKSSIGFDSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRLTNFIMRGEGKKGEKKCQKRSRSDDCSSPSLSTAFSSVAHSCDLSSLSPSALSSKKSRLCAEI 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2974g00003 206 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 166 IPR045279 GO:0009736
Gabi2974g00003 206 ProSiteProfiles Response regulatory domain profile. 22 149 IPR001789 GO:0000160
Gabi2974g00003 206 SUPERFAMILY CheY-like 21 150 IPR011006 -
Gabi2974g00003 206 SMART REC_2 21 145 IPR001789 GO:0000160
Gabi2974g00003 206 CDD REC_typeA_ARR 23 144 - -
Gabi2974g00003 206 Gene3D - 21 188 - -
Gabi2974g00003 206 Pfam Response regulator receiver domain 23 142 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2974g00003 Gabi-Chr2974 33675 36512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2974g00003 21 172 Response Regulator Gene Family AT5G62920 73.684 3.66e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2974g00003 Response_reg 1.2e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2974g00003 K14492 - gmx:100306152 302.367