Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2974g00002 ATGTCAGCACCTAGTCATGCAATTGCAAAGGCTGTGGTTGCCACAGCTGGGGCTATGTTATTTATTGCAGGGGTTTTCCTTTACTTCTTCCAAAAGTTTGTTCTTGCTAGATACCACCAAAGACACAAAGTTGCTGCAAGTTTTCGTCGAGAACCAGGAGTGAACCATGATGATATAAAGAAAGTTGGTGGTAATGTGAAAGCATTAATTGTTGAAGAAAATGGGGTTGATATACTGTATATGATGGACACAGAGAGCAGACAACTGATAACTGGATTCTCAAATAGTATATTGAATCCTAGTTTTGAGGATGATGAAGAAGAAAAAAGAATAGATAAAATGGTCCAAAGATCCAAAATATCTAGGCCTCAGGAGATTCCACAGGTATGTGAATCTCCATGCTCTACTCTGCCATCTTCCGTTTCAGCATCACTAACACCAATACAACACTTGCCACCAACACCTCTGCTAGCACCTCCATGTCCACCACTTCCACAAGCTTCACCAATGATTCTTGAGAAGAAAACTCAACAACCACCACCAGCTCCTCCTCCTCCACCACCACCACCACGAAAAGAAATTCCAAAGGCACCACCACCTGGTCCACCTCCACTTCCAAAGGCCAATGGATTCGTTTCATCACTGAAACCCCCACCTGTTCCTAAAGAGAAAGCAAACATAAAAAACAACAATGTGTCCATGGTAGGGGAAAGCACAAGAGAGAAGGGTGCAGGCCCAACAAGGTTGAAGCCTCTACACTGGGATAAAGTTGTTGCTAATGTTGATCATTCAACAGTCTGGGATAAGATCAATGATGGCTCTTTCAGGTTTGATGATGAACTCATAGAAACTCTCTTTGGATATAAGACAAACTATAAAACCCACGAAAGAAACAGAAGTCTTTCAACTTTGGCTAACTCCAATTCCAACATACCAACTCAAGTATTCATTCTGGAGCCACGAAAATCTCAAAACACTGCAATTGTGCTAAAATCCCTTGCAATTTCTCGCAAGGGAATCTTGGATGCACTACTTGATGGTCAGGGACTCAGTGTTGAAACACTTGAAAGACTCACTAAAATAGCTCCCACCAAAGAAGAAGAAGCCAAAATCATGCAATTCAGAGGCAACCCTGATAAGCTAGCTGATGCTGAGTCTTTCCTATATTACATCCTGAAAGCAGTTCCAACAGCATTCAATCGTTTGAAAGCAATGCTTTTCAGGTCGAGTTATGATTGTGAAGTTCTTCAGCTTAAGGAAAACCTACAAGCACTTGAAATGGGTTGTAAGGAACTGAGGACTAGTGGTCTGTTTTTGAAACTCCTTGAGGCCATTCTCAAAGCTGGGAACCGAATGAATGCTGGAACTTCAAGAGGCAATGCACAAGGTTTCAACCTGAGCGCTCTTAGAAAACTTTCTGATGTAAAAAGCACAGATGGGAAGACTAGTTTGCTTCACTTTATCGTGGAACAAGTGGTTCAGTCAGAAGGAAGAAGACAAGCTATGTATCAAAACCACAACCTTCACATAAGCAATGGTGAAACAAGCAATATCAATGAACCTAATTCAGATAGAGTGATACAACAAGAGGCAGAAAAAAAATATCAAATGCTTGGTTTACAAGTGTTAGGTGGGCTAAGTGATGAGTTATCTGAAGCAAAGAAAGCAGCCAGCATTGAGTATCAGAATTTCATCACAATGTGTTCCACTCTCAATGCTCATGTTATTGAAATTCGACAGATTATAACATGCTGTGGCAACACTGAGAAGGGTGGATTTATCAACGAAATGAAAGGGTTCCTAGAGGAATGTGAGGAGGAGCTTAAGGTTGTGAAAGAGGAGCAGACAAGGATCATGGAGCTTGTGACAAAAACCAACGAGTACTATCTAGCAGGGGCATCCAAAGACAATATGTCAAACCAGTTTCAACTGTTTGTTATTGTAAAAGATTTTGTTGACATGGTAGGTCAGGCTTGCATTGAACTTAAAAGGAAGCTGGAAAAGAAGAATGTAGGAGTGGAAGCTGTATCAACACCACCTTTGTCACCATCAAAGAGGACGCCACTCAGATTCCCTAACTTTGATTTATATTTTCTGTCAAATTTGTCAGAAACATCATCAAGCCAATCGGAAGATGATTTCTGA 2145 0.4103 MSAPSHAIAKAVVATAGAMLFIAGVFLYFFQKFVLARYHQRHKVAASFRREPGVNHDDIKKVGGNVKALIVEENGVDILYMMDTESRQLITGFSNSILNPSFEDDEEEKRIDKMVQRSKISRPQEIPQVCESPCSTLPSSVSASLTPIQHLPPTPLLAPPCPPLPQASPMILEKKTQQPPPAPPPPPPPPRKEIPKAPPPGPPPLPKANGFVSSLKPPPVPKEKANIKNNNVSMVGESTREKGAGPTRLKPLHWDKVVANVDHSTVWDKINDGSFRFDDELIETLFGYKTNYKTHERNRSLSTLANSNSNIPTQVFILEPRKSQNTAIVLKSLAISRKGILDALLDGQGLSVETLERLTKIAPTKEEEAKIMQFRGNPDKLADAESFLYYILKAVPTAFNRLKAMLFRSSYDCEVLQLKENLQALEMGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSALRKLSDVKSTDGKTSLLHFIVEQVVQSEGRRQAMYQNHNLHISNGETSNINEPNSDRVIQQEAEKKYQMLGLQVLGGLSDELSEAKKAASIEYQNFITMCSTLNAHVIEIRQIITCCGNTEKGGFINEMKGFLEECEEELKVVKEEQTRIMELVTKTNEYYLAGASKDNMSNQFQLFVIVKDFVDMVGQACIELKRKLEKKNVGVEAVSTPPLSPSKRTPLRFPNFDLYFLSNLSETSSSQSEDDF 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2974g00002 714 MobiDBLite consensus disorder prediction 121 148 - -
Gabi2974g00002 714 Gene3D Formin, FH2 domain 261 674 IPR042201 -
Gabi2974g00002 714 MobiDBLite consensus disorder prediction 174 226 - -
Gabi2974g00002 714 SMART it6_source 239 670 IPR015425 -
Gabi2974g00002 714 MobiDBLite consensus disorder prediction 176 207 - -
Gabi2974g00002 714 MobiDBLite consensus disorder prediction 119 148 - -
Gabi2974g00002 714 Coils Coil 415 435 - -
Gabi2974g00002 714 Coils Coil 594 621 - -
Gabi2974g00002 714 PANTHER FORMIN-RELATED 6 694 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gabi2974g00002 714 SUPERFAMILY Formin homology 2 domain (FH2 domain) 179 669 - -
Gabi2974g00002 714 Pfam Formin Homology 2 Domain 247 655 IPR015425 -
Gabi2974g00002 714 ProSiteProfiles Formin homology-2 (FH2) domain profile. 239 681 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2974g00002 Gabi-Chr2974 26259 29016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2974g00002 8 713 FH2 protein (formin) Gene Family AT1G70140 41.701 8.75e-158 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2974g00002 - - gsj:114409782 1033.09