Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2973g00038 ATGCGTAGAACCTTGCTGAAGAAAAACGGCAGCAAGCAAAGAAGGTGGACCCTTAATGATTTTGATATTGGAAAACCTCTTGGAAGGGGGAAATTTGGCCACGTCTATTTGGCCAGAGAAAAGAGAAGTAATCATATTGTTGCTCTGAAAGTGCTCTTTAAGAGCCAATTGCAACAATCCCAAGTTGAGCATCAGCTTCGGCGAGAAGTTGAAATACAAAGTCATCTCCGACATCCCCACATCTTACGCCTTTATGGATACTTTTATGATCAGAAACGAGTTTATTTGATTTTAGAGTATGCACCCAAAGGTGAACTTTACAAGGAGTTACAGAAATGCAAATATTTCAGTGAAAGGCGTGCAGCTACTTATGTTGCATCATTGGCCCGAGCCCTTATATATTGCCATGGAAAGCATGTAATACATAGGGACATTAAACCGGAGAACCTTCTAATTGGCGCACAGGGTGAACTTAAGATAGCAGACTTTGGATGGTCGGTGCACACATTCAATCGCAGGCGGACCATGTGTGGCACACTGGATTACCTTCCTCCTGAGATGGTGGAGAGTGTTGAACATGATGCGAGTGTGGATATATGGAGCCTTGGGGTCCTGTGCTACGAGTTTCTTTATGGAGTCCCTCCTTTTGAGGCTAAAGAGCATTCTGATACTTATAGGAGGATAGTACAAGTGGATCTCAAGTTCCCTCCTAAACCAATTGTATCTTCCACTGCAAAGGACCTCATCAGTCAGATGCTGGTTAAGGATTCCTCTCAACGTCTACCTTTGTACAAACTCCTCGAACACCCTTGGATTGTTCAGAATGCGGAGCCCTCCGGTGTATATAGGGGCTAG 855 0.4421 MRRTLLKKNGSKQRRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSTAKDLISQMLVKDSSQRLPLYKLLEHPWIVQNAEPSGVYRG 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2973g00038 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Gabi2973g00038 284 Gene3D Phosphorylase Kinase; domain 1 9 104 - -
Gabi2973g00038 284 Pfam Protein kinase domain 23 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2973g00038 284 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Gabi2973g00038 284 FunFam serine/threonine-protein kinase Aurora-1 105 280 - -
Gabi2973g00038 284 Gene3D Transferase(Phosphotransferase) domain 1 105 280 - -
Gabi2973g00038 284 SMART serkin_6 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2973g00038 284 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 11 283 IPR030616 GO:0004672
Gabi2973g00038 284 CDD STKc_Aurora 20 273 - -
Gabi2973g00038 284 PIRSF ILK 2 269 - -
Gabi2973g00038 284 ProSiteProfiles Protein kinase domain profile. 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2973g00038 284 SUPERFAMILY Protein kinase-like (PK-like) 12 276 IPR011009 -
Gabi2973g00038 284 FunFam Aurora kinase A 13 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2973g00038 Gabi-Chr2973 353582 364179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2973g00038 12 283 CBL-interacting serine-threonine protein kinases AT5G10930 34.767 1.41e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Gabi2973g00038 Pkinase 3.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2973g00038 K08850 - gmx:100775451 549.28