Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2973g00014 ATGGCCAAAGGAGCTCTAACGTTTATGTGCCTCTTCATATTCATGCTCAACTTCCACTCATCCAATGGAGAAGAACTCGAGGTTCTTTTATCCTTCAAATCTTCCATCCACGACCCTCTTCACTTTCTTTCTAACTGGTTCAATTCCTCTGCCACTATCTGCAAGTGGCATGGCATCACCTGTGACAACTCCTCCCACGTTAACTCCCTGGTTCTCTCCGGAAAAAACATCTCCGGCGAGATAATTTCCTCGTCCATTTTTCAACTTCCATACGTTACAAACCTCGACCTTTCAAACAACCAGTTAGTTGGGGAAATCTCTCTCAACTCTTCTTCTTCTCTGTCTCCATTTCGTTACCTCAACCTTAGCAACAACAACCTCACGGGTTCTTTGCCTCTGTCCTTGTTTTCACCGTCGTTTTCTCACCTCGAAACTCTGGACCTCTCGAACAACATGTTTTCAGGTAAAATACCAGACCAAGTTGGATTGCTTTCAAGCCTAAGGTATCTTGATCTCGGAGGAAACGTTTTGGTGGGAAAGATTCCAAATTCCATCACCAAGATGACAACTTTACAATACCTTACGTTGGCTTCAAACCAATTAGTGGGTGAAATCCCAACAGAGATAGGCCTAATGAAGAACTTGAAGTTGATTTACTTGGGTTACAACAACCTTTCAGGTGAGATACCAACAAGCATTGGAGAGTTATATTCTCTGAATCACCTTGATCTTGTTTACAACAATCTCACTGGACCAATTCCTGAAACTCTTGGAAACCTCACCGATCTTCAATTTCTCTTTCTCTACCAAAACAAACTTACCGGTTCAATTCCCCGGTCCATTTATGAACTGAAGAAGCTTATCTCACTTGATCTCAGCGATAACTCTCTTTCGGGTGAGATTTCTGAGCTTGTGGTTCAGCTCAAGAGAGTGGAGATTCTTCACCTTTTCTCAAACAGCTTCACTGGAAAGATTCCAAACGGTTTAGTATCACTGCCTCGCCTTCAAGTTCTTCAGCTATGGTCAAACAGATTAACGGGTGAGATTCCTCAAGAGCTAGGAAAGCATAGCAACCTCACTGTTCTGGACCTCTCTTCCAACAACCTCACAGGGAAGATCCCAGATAGCTTATGTGACTCTGGCAATCTTTACAAGCTTATCCTCTTCTCCAATTCTTTAGGAGGAGAAATCCCTAAAAGCTTAAGCTATTGCAGAACCTTACGCCGAGTGCGTCTCCAAAACAACAAGCTTTCTGGTGAATTATCATCAGAATTCACCAAACTGCCTAACATATACTTCTTGGATATCTCTGGCAATGAATTTTCTGGAAGGATAGGTGACAGAAAGTGGGATATGCCGGCGCTTCAAATGCTTGGTTTGGCTAACAACAACTTTTCCGGCGAGTTACCAAACTCTTTTGGGAGTGACAAATTGGAGGACTTGGACTTATCGGAGAATCAATTTTCAGGTTATATTCCAACCGGTTTGGGAAGCTTATCAGAGCTCATGCAATTGAAGCTAAGCAATAACAAGCTCTTTGGGAACATTCCAGAAGAACTCTGTTTGTGCAAGAAGCTTGTCGCTTTAGACCTCAGCCACAACCACCTTGCCGGGAAGATTCCGGTCAAACTTGGTGACATGCCGGTTCTCGGTTTACTTGACTTGTCCGAAAACCAATTATCCGGTGAAATTCCAAAGAATTTAGGAAGCGTGGAATCTCTTGTTCAGGTAAACATATCTCACAACCATTTTCATGGTAGTTTACCTTCCACCGGGGCTTTCCTTGCCATCAATGCTAGTGCAGTCACTGGCAACAGTCTCTGTGACCGTGACGGTGATGCTTCAAGCGGTTTGCCACCATGCAAGAGCGAACAGAATCACACTTGGTTGTTCATTCTGCCATGTTTTCTGTTGGGGTTGTTTGCGTTTGCTGCAACGGCTTTCCTCATCTTTTTCATTCGTCGAAGAAAGAACATGGAGCTTCGAAGAGTAGAGAATAATGAAGATGGCACATGGGAAATGCAGTTTTTCAACTCCAAGGCCGCGAAATCGATCAACATCAAAGATGTTTTGTCGTCAGCTAAAGAAGGAAAAGTGATTTCCAAAGGAAGGAACTGGGTTTCATACGAAGGAAAGTGCATGGGGAATAACGACATGCAGTTCGTGGTGAAAGAAATCGTTGACCCAAACTCTCTTCCACTGAGTTTTTGGGAAGACACGGTGAAGTTTGGGAAGCTTCAGCACCCAAACATCATTAACCTTATTGGAACGTGTAGGTCTTGCAAGAGAGGGTACTTGGTGTACGAGTACGAGGAGGGAAAGAATTTAAGCGAAATCCTAAACAACTTGAGTTGGCAACGGCGTTGGAAAATTGCCATGGGGATTGCAAAAGCACTAAAATTCTTGCATTCTCACTGTTCATCAATAGTTTTTGTTGATGAAGTTTCTCCAGAGATAGTTTGGATTAACATCAATGGTGTCCCTCGCCTGAAGCTCAACCCTCCGGGAATAATGGCATGCATGGATGTCAAGGGTTGCATTTCTTCACCCTACATTGCCCAAGAGGAAGATGTGACAGAGAAGAGTACGCGTGAGATATATGGGTTTGGAGTTATGCTGATTGAATTATTGACGGGAAGAAGCCCGATGGACACAGAAGCAGGGAATGGGAATGGCATGCACAAGAATATTGTGGAGTGGGCCCGCTACTGCTACTCCGACTGTCATCTTGACACGTGGATAGACCCTGTGATGAAGGGTGGAGATGCATTGACCTATCAGAACGACATCCTTGAGATAATGAATCTCGCCCTGCACTGTACCGCAACTGATCCCACAGCAAGGCCATGCGCAAGAGACGTACTCAAAGCCCTAGAGGCTGTTCACAGCAACACGCCCTCTTTTTGCTGA 2910 0.443 MAKGALTFMCLFIFMLNFHSSNGEELEVLLSFKSSIHDPLHFLSNWFNSSATICKWHGITCDNSSHVNSLVLSGKNISGEIISSSIFQLPYVTNLDLSNNQLVGEISLNSSSSLSPFRYLNLSNNNLTGSLPLSLFSPSFSHLETLDLSNNMFSGKIPDQVGLLSSLRYLDLGGNVLVGKIPNSITKMTTLQYLTLASNQLVGEIPTEIGLMKNLKLIYLGYNNLSGEIPTSIGELYSLNHLDLVYNNLTGPIPETLGNLTDLQFLFLYQNKLTGSIPRSIYELKKLISLDLSDNSLSGEISELVVQLKRVEILHLFSNSFTGKIPNGLVSLPRLQVLQLWSNRLTGEIPQELGKHSNLTVLDLSSNNLTGKIPDSLCDSGNLYKLILFSNSLGGEIPKSLSYCRTLRRVRLQNNKLSGELSSEFTKLPNIYFLDISGNEFSGRIGDRKWDMPALQMLGLANNNFSGELPNSFGSDKLEDLDLSENQFSGYIPTGLGSLSELMQLKLSNNKLFGNIPEELCLCKKLVALDLSHNHLAGKIPVKLGDMPVLGLLDLSENQLSGEIPKNLGSVESLVQVNISHNHFHGSLPSTGAFLAINASAVTGNSLCDRDGDASSGLPPCKSEQNHTWLFILPCFLLGLFAFAATAFLIFFIRRRKNMELRRVENNEDGTWEMQFFNSKAAKSINIKDVLSSAKEGKVISKGRNWVSYEGKCMGNNDMQFVVKEIVDPNSLPLSFWEDTVKFGKLQHPNIINLIGTCRSCKRGYLVYEYEEGKNLSEILNNLSWQRRWKIAMGIAKALKFLHSHCSSIVFVDEVSPEIVWININGVPRLKLNPPGIMACMDVKGCISSPYIAQEEDVTEKSTREIYGFGVMLIELLTGRSPMDTEAGNGNGMHKNIVEWARYCYSDCHLDTWIDPVMKGGDALTYQNDILEIMNLALHCTATDPTARPCARDVLKALEAVHSNTPSFC 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2973g00014 969 SUPERFAMILY L domain-like 332 589 - -
Gabi2973g00014 969 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 657 770 - -
Gabi2973g00014 969 ProSiteProfiles Protein kinase domain profile. 694 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2973g00014 969 ProSiteProfiles Leucine-rich repeat profile. 358 380 IPR001611 GO:0005515
Gabi2973g00014 969 ProSiteProfiles Leucine-rich repeat profile. 142 164 IPR001611 GO:0005515
Gabi2973g00014 969 Gene3D Phosphorylase Kinase; domain 1 657 770 - -
Gabi2973g00014 969 Pfam Leucine rich repeat 141 201 IPR001611 GO:0005515
Gabi2973g00014 969 Pfam Leucine rich repeat 477 536 IPR001611 GO:0005515
Gabi2973g00014 969 Pfam Leucine rich repeat 238 297 IPR001611 GO:0005515
Gabi2973g00014 969 Pfam Leucine rich repeat 333 393 IPR001611 GO:0005515
Gabi2973g00014 969 SUPERFAMILY L domain-like 34 373 - -
Gabi2973g00014 969 SMART LRR_typ_2 260 284 IPR003591 -
Gabi2973g00014 969 SMART LRR_typ_2 357 380 IPR003591 -
Gabi2973g00014 969 SMART LRR_typ_2 499 523 IPR003591 -
Gabi2973g00014 969 SMART LRR_typ_2 188 212 IPR003591 -
Gabi2973g00014 969 SMART LRR_typ_2 547 571 IPR003591 -
Gabi2973g00014 969 SMART LRR_typ_2 236 259 IPR003591 -
Gabi2973g00014 969 SMART LRR_typ_2 452 475 IPR003591 -
Gabi2973g00014 969 SMART LRR_typ_2 140 164 IPR003591 -
Gabi2973g00014 969 SMART LRR_typ_2 332 356 IPR003591 -
Gabi2973g00014 969 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 24 138 - -
Gabi2973g00014 969 Gene3D Transferase(Phosphotransferase) domain 1 772 967 - -
Gabi2973g00014 969 Gene3D Ribonuclease Inhibitor 306 629 IPR032675 -
Gabi2973g00014 969 Gene3D Ribonuclease Inhibitor 17 110 IPR032675 -
Gabi2973g00014 969 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 314 617 - -
Gabi2973g00014 969 Gene3D Ribonuclease Inhibitor 111 204 IPR032675 -
Gabi2973g00014 969 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 237 303 - -
Gabi2973g00014 969 Gene3D Ribonuclease Inhibitor 205 305 IPR032675 -
Gabi2973g00014 969 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 228 957 - -
Gabi2973g00014 969 Pfam Protein kinase domain 740 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2973g00014 969 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Gabi2973g00014 969 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 139 232 - -
Gabi2973g00014 969 SUPERFAMILY Protein kinase-like (PK-like) 681 959 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2973g00014 Gabi-Chr2973 137469 140714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2973g00014 11 959 Receptor kinase-like Gene Family AT2G25790 52.818 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Gabi2973g00014 Pkinase 6.2e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2973g00014 - - gmx:100777118 1451.42